ENSGALG00000043372


Gallus gallus

Features
Gene ID: ENSGALG00000043372
  
Biological name :RUNX3
  
Synonyms : runt related transcription factor 3 / RUNX3
  
Possible biological names infered from orthology : Q13761 / Q64131
  
Species: Gallus gallus
  
Chr. number: 23
Strand: 1
Band:
Gene start: 2440186
Gene end: 2486413
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSGALP00000049048
Ensembl peptide - ENSGALP00000059998
NCBI entrez gene - 769687     See in Manteia.
RefSeq - XM_015297733
swissprot - A0A1D5P8K0
swissprot - A0A1L1RMK2
Ensembl - ENSGALG00000043372
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 runx3ENSDARG00000052826Danio rerio
 RUNX3ENSG00000020633Homo sapiens
 Runx3ENSMUSG00000070691Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RUNX2 / runt related transcription factor 2 / Q08775* / Q13950*ENSGALG0000004027664
RUNX1 / runt related transcription factor 1 / Q01196*ENSGALG0000001602259


Protein motifs (from Interpro)
Interpro ID Name
 IPR000040  Acute myeloid leukemia 1 protein (AML1)/Runt
 IPR008967  p53-like transcription factor, DNA-binding
 IPR012346  p53/RUNT-type transcription factor, DNA-binding domain superfamily
 IPR013524  Runt domain
 IPR013711  Runx, C-terminal domain
 IPR027384  Runx, central domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0071559 response to transforming growth factor beta IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
RUNX3 regulates CDKN1A transcription
RUNX3 regulates NOTCH signaling
Regulation of RUNX3 expression and activity
RUNX3 regulates WNT signaling
RUNX3 regulates YAP1-mediated transcription
RUNX3 regulates p14-ARF


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr