ENSGALG00000043597


Gallus gallus

Features
Gene ID: ENSGALG00000043597
  
Biological name :RAD54B
  
Synonyms : DNA repair and recombination protein RAD54B / RAD54B
  
Possible biological names infered from orthology : fibrinogen silencer binding protein / FSBP / O95073 / Q6PFE3 / Q9Y620 / RAD54 homolog B (S. cerevisiae)
  
Species: Gallus gallus
  
Chr. number: 2
Strand: -1
Band:
Gene start: 126626957
Gene end: 126686324
  
Corresponding Affymetrix probe sets: Gga.2372.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000052510
NCBI entrez gene - 395449     See in Manteia.
RefSeq - NM_204710
RefSeq - XM_015282911
RefSeq - XM_015282912
RefSeq Peptide - NP_990041
swissprot - A0A1D5PI78
Ensembl - ENSGALG00000043597
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rad54bENSDARG00000092134Danio rerio
 FSBPENSG00000265817Homo sapiens
 Q9Y620ENSG00000197275Homo sapiens
 Q6PFE3ENSMUSG00000078773Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RAD54L / DNA repair and recombination protein RAD54-like / P70270* / Q92698* / RAD54 like*ENSGALG0000001035633
ATRX / ATRX, chromatin remodeler / P46100* / Q61687* / Transcriptional regulator ATRX *ENSGALG0000000784325
RAD54L2 / RAD54 like 2 / Q9Y4B4* / RAD54 like 2 (S. cerevisiae)*ENSGALG0000000324322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000330  SNF2-related, N-terminal domain
 IPR001650  Helicase, C-terminal
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0008340 determination of adult lifespan IEA
 biological_processGO:0010212 response to ionizing radiation IEA
 biological_processGO:0042493 response to drug IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr