ENSMUSG00000001023


Mus musculus

Features
Gene ID: ENSMUSG00000001023
  
Biological name :S100a5
  
Synonyms : P63084 / S100a5 / S100 calcium binding protein A5
  
Possible biological names infered from orthology : P33763
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F1
Gene start: 90608523
Gene end: 90611780
  
Corresponding Affymetrix probe sets: 10493816 (MoGene1.0st)   1449927_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000001049
Ensembl peptide - ENSMUSP00000102952
NCBI entrez gene - 20199     See in Manteia.
MGI - MGI:1338915
RefSeq - XM_006501181
RefSeq - NM_011312
RefSeq - XM_006501179
RefSeq - XM_006501180
RefSeq Peptide - NP_035442
swissprot - P63084
swissprot - Q149U2
Ensembl - ENSMUSG00000001023
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 icnENSDARG00000009978Danio rerio
 icn2ENSDARG00000055514Danio rerio
 s100sENSDARG00000036773Danio rerio
 s100tENSDARG00000055589Danio rerio
 P33763ENSG00000196420Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P07091 / S100a4 / S100 calcium binding protein A4 / P26447*ENSMUSG0000000102047
P14069 / S100a6 / S100 calcium binding protein A6 (calcyclin) / P06703* / S100 calcium binding protein A6*ENSMUSG0000000102547
S100a1 / S100 calcium binding protein A1 / P23297*ENSMUSG0000004408046
S100z / S100 calcium binding protein, zeta / Q8WXG8* / S100 calcium binding protein Z*ENSMUSG0000002167942
S100b / P50114 / S100 protein, beta polypeptide, neural / P04271* / S100 calcium binding protein B*ENSMUSG0000003320841
P62818 / S100a3 / S100 calcium binding protein A3ENSMUSG0000000102139
P50543 / S100a11 / Protein S100-A11 / P31949* / S100 calcium binding protein A11*ENSMUSG0000002790731
P08207 / S100a10 / S100 calcium binding protein A10 (calpactin) / P60903* / S100 calcium binding protein A10*ENSMUSG0000004195930
Gm42674 / P33764* / S100A3* / S100 calcium binding protein A3*ENSMUSG0000010551817


Protein motifs (from Interpro)
Interpro ID Name
 IPR001751  S100/Calbindin-D9k, conserved site
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR013787  S100/CaBP-9k-type, calcium binding, subdomain
 IPR018247  EF-Hand 1, calcium-binding site
 IPR028497  Protein S100-A5
 IPR034325  S-100


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0043025 neuronal cell body IDA
 molecular_functionGO:0005507 copper ion binding ISS
 molecular_functionGO:0005509 calcium ion binding ISS
 molecular_functionGO:0008270 zinc ion binding ISS
 molecular_functionGO:0042803 protein homodimerization activity ISO
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046914 transition metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Csf1tm1.1(CSF1)Flv/Csf1tm1.1(CSF1)Flv,Csf2/Il3tm1.1(CSF2,IL3)Flv/Csf2/Il3tm1.1(CSF2,IL3)Flv,Il2rgtm1.1Flv/Il2rgtm1.1Flv,Rag2tm1.1Flv/Rag2tm1.1Flv,Tg(SIRPA)1Flv/0,Thpotm1.1(TPO)Flv/Thpotm1.1(TPO)Flv
Genetic Background: involves: 129S4/SvJae * BALB/cAnNTac

 MP:0011677 abnormal olfactory sensory neuron physiology "any functional anomaly of cells that innervate the olfactory epithelium and are responsible for receiving and transmitting odorant signals" [MGI:csmith]
Show

Allelic Composition: Csf1tm1.1(CSF1)Flv/Csf1tm1.1(CSF1)Flv,Csf2/Il3tm1.1(CSF2,IL3)Flv/Csf2/Il3tm1.1(CSF2,IL3)Flv,Il2rgtm1.1Flv/Il2rgtm1.1Flv,Rag2tm1.1Flv/Rag2tm1.1Flv,Tg(SIRPA)1Flv/0,Thpotm1.1(TPO)Flv/Thpotm1.1(TPO)Flv
Genetic Background: involves: 129S4/SvJae * BALB/cAnNTac

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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