ENSMUSG00000028382


Mus musculus

Features
Gene ID: ENSMUSG00000028382
  
Biological name :Ptbp3
  
Synonyms : Polypyrimidine tract-binding protein 3 / Ptbp3 / Q8BHD7
  
Possible biological names infered from orthology : O95758
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: B3
Gene start: 59471868
Gene end: 59549364
  
Corresponding Affymetrix probe sets: 10513381 (MoGene1.0st)   1424083_at (Mouse Genome 430 2.0 Array)   1424084_at (Mouse Genome 430 2.0 Array)   1455819_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000134490
Ensembl peptide - ENSMUSP00000030076
Ensembl peptide - ENSMUSP00000099947
Ensembl peptide - ENSMUSP00000122138
Ensembl peptide - ENSMUSP00000122840
Ensembl peptide - ENSMUSP00000133612
Ensembl peptide - ENSMUSP00000133884
Ensembl peptide - ENSMUSP00000133886
Ensembl peptide - ENSMUSP00000133996
Ensembl peptide - ENSMUSP00000134102
Ensembl peptide - ENSMUSP00000134290
NCBI entrez gene - 230257     See in Manteia.
MGI - MGI:1923334
RefSeq - XM_006537854
RefSeq - NM_144904
RefSeq - NM_178164
RefSeq - XM_006537851
RefSeq - XM_006537852
RefSeq Peptide - NP_659153
RefSeq Peptide - NP_835458
swissprot - G3UXA6
swissprot - Q8BHD7
swissprot - F7C521
swissprot - G3UXZ6
swissprot - G3UXZ8
swissprot - G3UY95
swissprot - G3UZG7
swissprot - G3UZ01
swissprot - G8JL74
Ensembl - ENSMUSG00000028382
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptbp3ENSDARG00000043757Danio rerio
 PTBP3ENSGALG00000015669Gallus gallus
 PTBP3ENSG00000119314Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ptbp1 / polypyrimidine tract binding protein 1 / P26599*ENSMUSG0000000649878
Ptbp2 / Q91Z31 / Polypyrimidine tract-binding protein 2 / Q9UKA9*ENSMUSG0000002813469
Hnrnpl / Q8R081 / Heteroous nuclear ribonucleoprotein L / P14866* / heterogeneous nuclear ribonucleoprotein L*ENSMUSG0000001516525
Q921F4 / Hnrnpll / Heteroous nuclear ribonucleoprotein L-like / Q8WVV9* / heterogeneous nuclear ribonucleoprotein L like*ENSMUSG0000002409525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006536  HnRNP-L/PTB
 IPR033110  ROD1, RNA recognition motif 4
 IPR034326  ROD1, RNA recognition motif 1
 IPR034798  Polypyrimidine tract-binding protein1/2/3, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0033119 negative regulation of RNA splicing ISO
 biological_processGO:0043249 erythrocyte maturation IEA
 biological_processGO:0045595 regulation of cell differentiation IEA
 biological_processGO:0048025 negative regulation of mRNA splicing, via spliceosome IMP
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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