ENSG00000119314


Homo sapiens

Features
Gene ID: ENSG00000119314
  
Biological name :PTBP3
  
Synonyms : O95758 / polypyrimidine tract binding protein 3 / PTBP3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: q32
Gene start: 112217716
Gene end: 112333667
  
Corresponding Affymetrix probe sets: 207223_s_at (Human Genome U133 Plus 2.0 Array)   214697_s_at (Human Genome U133 Plus 2.0 Array)   214698_at (Human Genome U133 Plus 2.0 Array)   224617_at (Human Genome U133 Plus 2.0 Array)   224618_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000363375
Ensembl peptide - ENSP00000363373
Ensembl peptide - ENSP00000388024
Ensembl peptide - ENSP00000414921
Ensembl peptide - ENSP00000210227
Ensembl peptide - ENSP00000334499
Ensembl peptide - ENSP00000340705
NCBI entrez gene - 9991     See in Manteia.
OMIM - 607527
RefSeq - XM_017015365
RefSeq - NM_001163788
RefSeq - NM_001163790
RefSeq - NM_001244896
RefSeq - NM_001244897
RefSeq - NM_001244898
RefSeq - NM_005156
RefSeq - XM_006717346
RefSeq - XM_011519265
RefSeq Peptide - NP_001157260
RefSeq Peptide - NP_001231825
RefSeq Peptide - NP_001231826
RefSeq Peptide - NP_001231827
RefSeq Peptide - NP_005147
RefSeq Peptide - NP_001157262
swissprot - B1ALY4
swissprot - O95758
swissprot - X6R242
swissprot - A0A024R163
Ensembl - ENSG00000119314
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptbp3ENSDARG00000043757Danio rerio
 PTBP3ENSGALG00000015669Gallus gallus
 Ptbp3ENSMUSG00000028382Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTBP1 / P26599 / polypyrimidine tract binding protein 1ENSG0000001130476
PTBP2 / Q9UKA9 / polypyrimidine tract binding protein 2ENSG0000011756967
HNRNPL / P14866 / heterogeneous nuclear ribonucleoprotein LENSG0000010482425
Q8WVV9 / HNRNPLL / heterogeneous nuclear ribonucleoprotein L likeENSG0000014388924
AC008982.1ENSG0000026808310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006536  HnRNP-L/PTB
 IPR033110  ROD1, RNA recognition motif 4
 IPR034326  ROD1, RNA recognition motif 1
 IPR034798  Polypyrimidine tract-binding protein1/2/3, RNA recognition motif 2
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0009653 anatomical structure morphogenesis TAS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0033119 negative regulation of RNA splicing IDA
 biological_processGO:0043249 erythrocyte maturation IEA
 biological_processGO:0045595 regulation of cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding TAS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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