ENSG00000143889


Homo sapiens

Features
Gene ID: ENSG00000143889
  
Biological name :HNRNPLL
  
Synonyms : heterogeneous nuclear ribonucleoprotein L like / HNRNPLL / Q8WVV9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: p22.1
Gene start: 38561978
Gene end: 38603586
  
Corresponding Affymetrix probe sets: 1554453_at (Human Genome U133 Plus 2.0 Array)   225385_s_at (Human Genome U133 Plus 2.0 Array)   225386_s_at (Human Genome U133 Plus 2.0 Array)   236104_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386575
Ensembl peptide - ENSP00000386695
Ensembl peptide - ENSP00000476852
Ensembl peptide - ENSP00000415766
Ensembl peptide - ENSP00000396669
Ensembl peptide - ENSP00000390625
Ensembl peptide - ENSP00000387088
Ensembl peptide - ENSP00000272249
Ensembl peptide - ENSP00000351136
Ensembl peptide - ENSP00000368195
NCBI entrez gene - 92906     See in Manteia.
OMIM - 611208
RefSeq - XM_011533166
RefSeq - NM_001142650
RefSeq - NM_138394
RefSeq - XM_005264639
RefSeq - XM_005264640
RefSeq - XM_011533165
RefSeq Peptide - NP_612403
RefSeq Peptide - NP_001136122
swissprot - D6W592
swissprot - C9JJZ7
swissprot - C9IYN3
swissprot - B7WPG3
swissprot - A0A0S2Z6K1
swissprot - H7C464
swissprot - H7BXH8
swissprot - Q8WVV9
Ensembl - ENSG00000143889
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01100304.1ENSDARG00000116101Danio rerio
 HNRNPLLENSGALG00000008504Gallus gallus
 Q921F4ENSMUSG00000024095Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPL / P14866 / heterogeneous nuclear ribonucleoprotein LENSG0000010482455
PTBP1 / P26599 / polypyrimidine tract binding protein 1ENSG0000001130426
PTBP3 / O95758 / polypyrimidine tract binding protein 3ENSG0000011931425
PTBP2 / Q9UKA9 / polypyrimidine tract binding protein 2ENSG0000011756925
AC008982.1ENSG0000026808322


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR006536  HnRNP-L/PTB
 IPR034983  hnRPLL, RNA recognition motif 3
 IPR034985  hnRPLL, RNA recognition motif 1
 IPR034986  hnRPLL, RNA recognition motif 2
 IPR034987  hnRPLL, RNA recognition motif 4
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0033120 positive regulation of RNA splicing IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016020 membrane HDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003729 mRNA binding IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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