ENSMUSG00000029298


Mus musculus

Features
Gene ID: ENSMUSG00000029298
  
Biological name :Gbp9
  
Synonyms : Gbp9
  
Possible biological names infered from orthology : GBP6 / guanylate binding protein family member 6 / Q6ZN66
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: E5
Gene start: 105077630
Gene end: 105139539
  
Corresponding Affymetrix probe sets: 10531980 (MoGene1.0st)   1438027_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000031238
Ensembl peptide - ENSMUSP00000098521
NCBI entrez gene - 236573     See in Manteia.
MGI - MGI:3605620
RefSeq - XM_006534926
RefSeq - NM_172777
RefSeq - XM_006534924
RefSeq - XM_006534925
RefSeq Peptide - NP_766365
swissprot - Q8BTS3
Ensembl - ENSMUSG00000029298
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CABZ01068208.1ENSDARG00000112675Danio rerio
 CABZ01068209.1ENSDARG00000110616Danio rerio
 gbp1ENSDARG00000038668Danio rerio
 gbp2ENSDARG00000038669Danio rerio
 gbp4ENSDARG00000068857Danio rerio
 si:ch211-209n20.1ENSDARG00000099382Danio rerio
 si:dkeyp-30d6.2ENSDARG00000103564Danio rerio
 unm_sa911ENSDARG00000034063Danio rerio
 zmp:0000000527ENSDARG00000005627Danio rerio
 ENSGALG00000000720Gallus gallus
 GBPENSGALG00000026152Gallus gallus
 GBP6ENSG00000183347Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gbp6 / Q6ZN66* / guanylate binding protein family member 6*ENSMUSG0000010471384
Gm43302 / GBP6* / Q6ZN66* / guanylate binding protein family member 6*ENSMUSG0000007936284
Gbp10 / GBP6* / Q6ZN66* / guanylate binding protein family member 6*ENSMUSG0000010509683
Gbp4 / Mus musculus guanylate binding protein 4 (Gbp4), transcript variant 6, mRNA. / GBP6* / Q6ZN66* / guanylate binding protein family member 6*ENSMUSG0000007936378
Gbp8 / GBP6* / Q6ZN66* / guanylate binding protein family member 6*ENSMUSG0000003443871
Gbp7 / GBP4* / Q8N8V2* / Q96PP9* / guanylate binding protein 4* / guanylate binding protein 7*ENSMUSG0000004025365
Gbp11 / Mus musculus guanylate binding protein 11 (Gbp11), transcript variant 1, mRNA. / GBP6* / Q6ZN66* / guanylate binding protein family member 6*ENSMUSG0000009202163
Gbp3 / Q61107 / Mus musculus guanylate binding protein 3 (Gbp3), transcript variant 4, mRNA. / GBP4* / GBP7* / Q96PP9* / Q8N8V2* / guanylate binding protein 4* / guanylate binding protein 7*ENSMUSG0000002826863
Gbp2 / Q9Z0E6 / Guanylate-binding protein 2 / P32456*ENSMUSG0000002827047
Gbp2b / GBP2* / P32456* / guanylate binding protein 2*ENSMUSG0000004026446
Gbp5 / Q8CFB4 / Guanylate-binding protein 5 / Q96PP8*ENSMUSG0000010550442


Protein motifs (from Interpro)
Interpro ID Name
 IPR003191  Guanylate-binding protein/Atlastin, C-terminal
 IPR015894  Guanylate-binding protein, N-terminal
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030386  GB1/RHD3-type guanine nucleotide-binding (G) domain
 IPR036543  Guanylate-binding protein, C-terminal domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0042832 defense response to protozoan IDA
 biological_processGO:0044406 adhesion of symbiont to host IDA
 biological_processGO:0050830 defense response to Gram-positive bacterium IDA
 biological_processGO:0071346 cellular response to interferon-gamma IDA
 cellular_componentGO:0020005 symbiont-containing vacuole membrane IDA
 cellular_componentGO:0031410 cytoplasmic vesicle IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr