ENSMUSG00000029408


Mus musculus

Features
Gene ID: ENSMUSG00000029408
  
Biological name :Abcb9
  
Synonyms : Abcb9 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9JJ59
  
Possible biological names infered from orthology : ATP binding cassette subfamily B member 9 / Q9NP78
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 124061530
Gene end: 124095798
  
Corresponding Affymetrix probe sets: 10533734 (MoGene1.0st)   1416263_at (Mouse Genome 430 2.0 Array)   1416264_at (Mouse Genome 430 2.0 Array)   1430394_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000122969
Ensembl peptide - ENSMUSP00000031354
Ensembl peptide - ENSMUSP00000118908
NCBI entrez gene - 56325     See in Manteia.
MGI - MGI:1861729
RefSeq - NM_019875
RefSeq - XM_017321012
RefSeq Peptide - NP_063928
swissprot - D6RFD9
swissprot - Q9JJ59
Ensembl - ENSMUSG00000029408
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 abcb9ENSDARG00000056200Danio rerio
 ABCB9ENSGALG00000003736Gallus gallus
 ABCB9ENSG00000150967Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tap2 / P36371 / transporter 2, ATP-binding cassette, sub-family B (MDR/TAP) / Q03519* / AL669918.1* / transporter 2, ATP binding cassette subfamily B member*ENSMUSG0000002433937
Tap1 / P21958 / transporter 1, ATP-binding cassette, sub-family B (MDR/TAP) / Q03518* / transporter 1, ATP binding cassette subfamily B member*ENSMUSG0000003732135
Abcb10 / Q9JI39 / ATP-binding cassette, sub-family B (MDR/TAP), member 10 / Q9NRK6* / ATP binding cassette subfamily B member 10*ENSMUSG0000003197432
Abcb8 / Q9CXJ4 / ATP-binding cassette, sub-family B (MDR/TAP), member 8 / Q9NUT2* / ATP binding cassette subfamily B member 8*ENSMUSG0000002897328


Protein motifs (from Interpro)
Interpro ID Name
 IPR003439  ABC transporter-like
 IPR003593  AAA+ ATPase domain
 IPR011527  ABC transporter type 1, transmembrane domain
 IPR017871  ABC transporter, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR030254  ATP-binding cassette subfamily B member 9
 IPR036640  ABC transporter type 1, transmembrane domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0015833 peptide transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 cellular_componentGO:0005764 lysosome ISO
 cellular_componentGO:0005765 lysosomal membrane IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0015440 peptide-transporting ATPase activity IEA
 molecular_functionGO:0016887 ATPase activity IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA
 molecular_functionGO:0042626 ATPase activity, coupled to transmembrane movement of substances IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
ABC-family proteins mediated transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002768 small adrenal glands "reduced size of endocrine glands located above the kidneys responsible for hormone and epinephrine secretion" [J:78062]
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Allelic Composition: 4932438A13Riktm1b(EUCOMM)Hmgu/4932438A13Riktm1b(EUCOMM)Hmgu
Genetic Background: B6N(Cg)-4932438A13Riktm1b(EUCOMM)Hmgu/J

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000029408 Abcb9 / Q9JJ59 / ATP-binding cassette, sub-family B (MDR/TAP), member 9 / Q9NP78* / ATP binding cassette subfamily B member 9*  / complex






 

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