ENSMUSG00000031949


Mus musculus

Features
Gene ID: ENSMUSG00000031949
  
Biological name :Adat1
  
Synonyms : Adat1 / Mus musculus adenosine deaminase, tRNA-specific 1 (Adat1), transcript variant 3, mRNA. / Q9JHI2
  
Possible biological names infered from orthology : adenosine deaminase, tRNA specific 1 / Q9BUB4
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: E1
Gene start: 111966908
Gene end: 111992302
  
Corresponding Affymetrix probe sets: 10581926 (MoGene1.0st)   1420748_a_at (Mouse Genome 430 2.0 Array)   1425390_at (Mouse Genome 430 2.0 Array)   1444049_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000034427
Ensembl peptide - ENSMUSP00000113201
Ensembl peptide - ENSMUSP00000117279
NCBI entrez gene - 30947     See in Manteia.
MGI - MGI:1353631
RefSeq - XM_006531076
RefSeq - NM_001357185
RefSeq - NM_013925
RefSeq - XM_006531075
RefSeq Peptide - NP_038953
RefSeq Peptide - NP_001344114
swissprot - Q9JHI2
swissprot - D3Z6J6
Ensembl - ENSMUSG00000031949
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adat1ENSDARG00000061348Danio rerio
 ADAT1ENSGALG00000000908Gallus gallus
 ADAT1ENSG00000065457Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Adar / Q99MU3 / Mus musculus adenosine deaminase, RNA-specific (Adar), transcript variant 4, mRNA. / P55265* / adenosine deaminase, RNA specific*ENSMUSG0000002795123
Adarb1 / Q91ZS8 / Double-stranded RNA-specific editase 1 / P78563* / adenosine deaminase, RNA specific B1*ENSMUSG0000002026222
Adad1 / Q5SUE7 / Adenosine deaminase domain-containing protein 1 / Q96M93* / adenosine deaminase domain containing 1*ENSMUSG0000002771921
Adarb2 / Q9JI20 / adenosine deaminase, RNA-specific, B2 / Q9NS39* / adenosine deaminase, RNA specific B2 (inactive)*ENSMUSG0000005255121
Adad2 / adenosine deaminase domain containing 2 / Q8NCV1*ENSMUSG0000002426617


Protein motifs (from Interpro)
Interpro ID Name
 IPR002466  Adenosine deaminase/editase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008033 tRNA processing ISO
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004000 adenosine deaminase activity IEA
 molecular_functionGO:0008251 tRNA-specific adenosine deaminase activity ISO
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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