ENSMUSG00000033623


Mus musculus

Features
Gene ID: ENSMUSG00000033623
  
Biological name :Pcgf3
  
Synonyms : Pcgf3 / Polycomb group RING finger protein 3 / Q8BTQ0
  
Possible biological names infered from orthology : polycomb group ring finger 3 / Q3KNV8
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: F
Gene start: 108461232
Gene end: 108506976
  
Corresponding Affymetrix probe sets: 10524004 (MoGene1.0st)   1428423_at (Mouse Genome 430 2.0 Array)   1428424_at (Mouse Genome 430 2.0 Array)   1440203_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142465
Ensembl peptide - ENSMUSP00000041790
Ensembl peptide - ENSMUSP00000108216
NCBI entrez gene - 69587     See in Manteia.
MGI - MGI:1916837
RefSeq - NM_172716
RefSeq - XM_006535208
RefSeq Peptide - NP_766304
swissprot - A0A0G2JDR0
swissprot - Q8BTQ0
Ensembl - ENSMUSG00000033623
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PCGF3ENSGALG00000015333Gallus gallus
 PCGF3ENSG00000185619Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcgf5 / Q3UK78 / Polycomb group RING finger protein 5 / Q86SE9* / polycomb group ring finger 5*ENSMUSG0000002480545
Pcgf1 / Q8R023 / Polycomb group RING finger protein 1 / Q9BSM1* / polycomb group ring finger 1*ENSMUSG0000006967839
Pcgf2 / P23798 / Polycomb group RING finger protein 2 / P35227* / polycomb group ring finger 2*ENSMUSG0000001853735
Pcgf6 / Q99NA9 / Polycomb group RING finger protein 6 / Q9BYE7* / polycomb group ring finger 6*ENSMUSG0000002505034
Bmi1 / P25916 / Polycomb complex protein BMI-1 / P35226* / COMMD3-BMI1* / COMMD3-BMI1 readthrough* / BMI1 proto-oncogene, polycomb ring finger*ENSMUSG0000002673933


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR032443  RAWUL domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0036353 histone H2A-K119 monoubiquitination IMP
 biological_processGO:0060819 inactivation of X chromosome by genetic imprinting IMP
 cellular_componentGO:0000805 X chromosome IDA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0031519 PcG protein complex IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000690 absent spleen "missing organ that functions to filter blood and to store red corpuscles and platelets" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:55583]
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Allelic Composition: Hsp90aa1Tg(Tyr)2396BOve/Hsp90aa1Tg(Tyr)2396BOve
Genetic Background: FVB/N-Hsp90aa1Tg(Tyr)2396BOve

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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