ENSMUSG00000024805


Mus musculus

Features
Gene ID: ENSMUSG00000024805
  
Biological name :Pcgf5
  
Synonyms : Pcgf5 / Polycomb group RING finger protein 5 / Q3UK78
  
Possible biological names infered from orthology : polycomb group ring finger 5 / Q86SE9
  
Species: Mus musculus
  
Chr. number: 19
Strand: 1
Band: C2
Gene start: 36348309
Gene end: 36460970
  
Corresponding Affymetrix probe sets: 10462683 (MoGene1.0st)   1429564_at (Mouse Genome 430 2.0 Array)   1434666_at (Mouse Genome 430 2.0 Array)   1453636_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000153211
Ensembl peptide - ENSMUSP00000153681
Ensembl peptide - ENSMUSP00000153464
Ensembl peptide - ENSMUSP00000153342
Ensembl peptide - ENSMUSP00000058730
Ensembl peptide - ENSMUSP00000071245
Ensembl peptide - ENSMUSP00000153066
Ensembl peptide - ENSMUSP00000153206
NCBI entrez gene - 76073     See in Manteia.
MGI - MGI:1923505
RefSeq - XM_011247391
RefSeq - XM_011247392
RefSeq - XM_011247395
RefSeq - NM_029508
RefSeq - XM_006527431
RefSeq - XM_006527433
RefSeq Peptide - NP_083784
swissprot - Q3UK78
swissprot - A0A286YDQ6
swissprot - A0A286YD06
swissprot - B7ZP24
Ensembl - ENSMUSG00000024805
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 B3DK16ENSDARG00000071007Danio rerio
 pcgf5bENSDARG00000052388Danio rerio
 PCGF5ENSGALG00000006502Gallus gallus
 PCGF5ENSG00000180628Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Pcgf3 / Q8BTQ0 / Polycomb group RING finger protein 3 / Q3KNV8* / polycomb group ring finger 3*ENSMUSG0000003362346
Pcgf6 / Q99NA9 / Polycomb group RING finger protein 6 / Q9BYE7* / polycomb group ring finger 6*ENSMUSG0000002505034
Pcgf1 / Q8R023 / Polycomb group RING finger protein 1 / Q9BSM1* / polycomb group ring finger 1*ENSMUSG0000006967833
Pcgf2 / P23798 / Polycomb group RING finger protein 2 / P35227* / polycomb group ring finger 2*ENSMUSG0000001853731
Bmi1 / P25916 / Polycomb complex protein BMI-1 / P35226* / COMMD3-BMI1* / COMMD3-BMI1 readthrough* / BMI1 proto-oncogene, polycomb ring finger*ENSMUSG0000002673929


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site
 IPR032443  RAWUL domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0036353 histone H2A-K119 monoubiquitination IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISO
 biological_processGO:0060819 inactivation of X chromosome by genetic imprinting IMP
 cellular_componentGO:0000805 X chromosome IDA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus ISO
 cellular_componentGO:0005813 centrosome ISO
 cellular_componentGO:0031519 PcG protein complex ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
RUNX1 interacts with co-factors whose precise effect on RUNX1 targets is not known


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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