ENSMUSG00000033949


Mus musculus

Features
Gene ID: ENSMUSG00000033949
  
Biological name :Trim36
  
Synonyms : E3 ubiquitin-protein ligase Trim36 / Q80WG7 / Trim36
  
Possible biological names infered from orthology : Q9NQ86 / tripartite motif containing 36
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: C
Gene start: 46165302
Gene end: 46212607
  
Corresponding Affymetrix probe sets: 10458767 (MoGene1.0st)   1441969_at (Mouse Genome 430 2.0 Array)   1455837_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000037978
Ensembl peptide - ENSMUSP00000129771
NCBI entrez gene - 28105     See in Manteia.
MGI - MGI:106264
RefSeq - NM_001170855
RefSeq - NM_178872
RefSeq Peptide - NP_001164326
RefSeq Peptide - NP_849203
swissprot - Q80WG7
swissprot - E9Q3A0
Ensembl - ENSMUSG00000033949
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 trim36ENSDARG00000062794Danio rerio
 TRIM36ENSGALG00000008188Gallus gallus
 Q9NQ86ENSG00000152503Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7TNM2 / Trim46 / tripartite motif-containing 46 / Q7Z4K8*ENSMUSG0000004276644
Mid1 / O70583 / E3 ubiquitin-protein ligase Midline-1 / O15344* / midline 1*ENSMUSG0000003529924
Mid2 / Mus musculus midline 2 (Mid2), transcript variant 2, mRNA. / Q9UJV3* / midline 2*ENSMUSG0000000026623
Q505D9 / Trim67 / Tripartite motif-containing protein 67 / Q6ZTA4* / tripartite motif containing 67*ENSMUSG0000003691322
Trim9 / Q8C7M3 / E3 ubiquitin-protein ligase TRIM9 / Q9C026* / tripartite motif containing 9*ENSMUSG0000002107122
Trim55 / tripartite motif-containing 55 / Q9BYV6*ENSMUSG0000006091319
Q9ERP3 / Trim54 / Tripartite motif-containing protein 54 / Q9BYV2* / tripartite motif containing 54*ENSMUSG0000006207715
Trim63 / tripartite motif-containing 63 / Q969Q1*ENSMUSG0000002883414
Fsd1l / Q8BYN5 / Mus musculus fibronectin type III and SPRY domain containing 1-like (Fsd1l), transcript variant 3, mRNA. / Q9BXM9* / fibronectin type III and SPRY domain containing 1 like*ENSMUSG0000005475213
Fsd1 / Q7TPM6 / Fibronectin type III and SPRY domain-containing protein 1 / Q9BTV5* / fibronectin type III and SPRY domain containing 1*ENSMUSG0000001158913


Protein motifs (from Interpro)
Interpro ID Name
 IPR000315  B-box-type zinc finger
 IPR001841  Zinc finger, RING-type
 IPR001870  B30.2/SPRY domain
 IPR003961  Fibronectin type III
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR013783  Immunoglobulin-like fold
 IPR017903  COS domain
 IPR017907  Zinc finger, RING-type, conserved site
 IPR027370  RING-type zinc-finger, LisH dimerisation motif
 IPR027726  E3 ubiquitin-protein ligase Trim36
 IPR035727  TRIM36, PRY/SPRY domain
 IPR036116  Fibronectin type III superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000281 mitotic cytokinesis IEA
 biological_processGO:0001578 microtubule bundle formation ISO
 biological_processGO:0007051 spindle organization IEA
 biological_processGO:0007340 acrosome reaction IMP
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0051726 regulation of cell cycle IMP
 biological_processGO:0070507 regulation of microtubule cytoskeleton organization IEA
 cellular_componentGO:0001669 acrosomal vesicle IDA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015630 microtubule cytoskeleton ISO
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0043014 alpha-tubulin binding IDA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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