ENSMUSG00000038048


Mus musculus

Features
Gene ID: ENSMUSG00000038048
  
Biological name :Cntnap5c
  
Synonyms : Cntnap5c / Contactin-associated protein like 5-3 / Q0V8T7
  
Possible biological names infered from orthology : CNTNAP5 / contactin associated protein like 5 / Q8WYK1
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: D
Gene start: 57769570
Gene end: 58410355
  
Corresponding Affymetrix probe sets: 10446309 (MoGene1.0st)   10446312 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000075416
NCBI entrez gene - 620292     See in Manteia.
MGI - MGI:3646013
RefSeq - XM_017317594
RefSeq - NM_001081653
RefSeq - XM_006524749
RefSeq - XM_011246557
RefSeq - XM_006524741
RefSeq - XM_006524742
RefSeq - XM_006524743
RefSeq - XM_006524744
RefSeq - XM_006524746
RefSeq - XM_006524747
RefSeq - XM_006524748
RefSeq Peptide - NP_001075122
swissprot - Q0V8T7
Ensembl - ENSMUSG00000038048
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cntnap5aENSDARG00000073920Danio rerio
 cntnap5bENSDARG00000075189Danio rerio
 cntnap5lENSDARG00000073802Danio rerio
 CNTNAP5ENSGALG00000011577Gallus gallus
 Q8WYK1ENSG00000155052Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q0V8T9 / Cntnap5a / Contactin-associated protein like 5-1 / Q8WYK1* / CNTNAP5* / contactin associated protein like 5*ENSMUSG0000007069588
Q0V8T8 / Cntnap5b / Contactin-associated protein like 5-2 / Q8WYK1* / CNTNAP5* / contactin associated protein like 5*ENSMUSG0000006702885
Q99P47 / Cntnap4 / Contactin-associated protein-like 4 / Q9C0A0*ENSMUSG0000003177254
Cntnap3 / contactin associated protein-like 3 / Q96NU0* / Q9BZ76* / CNTNAP3B* / BX088645.1* / contactin associated protein like 3B*ENSMUSG0000003306349
Q9CPW0 / Cntnap2 / Contactin-associated protein-like 2 / Q9UHC6*ENSMUSG0000003941948
O54991 / Cntnap1 / Contactin-associated protein 1 / P78357*ENSMUSG0000001716737
Nrxn2 / neurexin II / P58401* / Q9P2S2* / neurexin 2*ENSMUSG0000003376822
Nrxn3 / Q6P9K9 / Q8C985 / Neurexin-3 / Q9Y4C0* / Q9HDB5*ENSMUSG0000006639221
Nrxn1 / P0DI97 / Q9CS84 / Neurexin-1 / P58400* / Q9ULB1*ENSMUSG0000002410921


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR000742  EGF-like domain
 IPR001791  Laminin G domain
 IPR002181  Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily
 IPR028874  Contactin-associated protein-like 5
 IPR036056  Fibrinogen-like, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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