ENSMUSG00000039198


Mus musculus

Features
Gene ID: ENSMUSG00000039198
  
Biological name :Ptchd3
  
Synonyms : patched domain containing 3 / Ptchd3 / Q0EEE2
  
Possible biological names infered from orthology : Q3KNS1
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: E2
Gene start: 121830247
Gene end: 121843423
  
Corresponding Affymetrix probe sets: 10383625 (MoGene1.0st)   1431518_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000035709
NCBI entrez gene - 74675     See in Manteia.
MGI - MGI:1921925
RefSeq - NM_029049
RefSeq Peptide - NP_083325
swissprot - Q0EEE2
Ensembl - ENSMUSG00000039198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR792422.1ENSDARG00000010075Danio rerio
 si:ch211-250m6.7ENSDARG00000068874Danio rerio
 PTCHD3ENSGALG00000023347Gallus gallus
 PTCHD3ENSG00000182077Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ptchd4 / Mus musculus patched domain containing 4 (Ptchd4), transcript variant 1, mRNA. / Q6ZW05* / patched domain containing 4*ENSMUSG0000004225623
Ptchd1 / Q14B62 / Patched domain-containing protein 1 / Q96NR3* / patched domain containing 1*ENSMUSG0000004155222
Npc1 / O35604 / Niemann-Pick C1 protein / O15118* / NPC intracellular cholesterol transporter 1*ENSMUSG0000002441322
Npc1l1 / NPC1 like intracellular cholesterol transporter 1 / Q9UHC9*ENSMUSG0000002044721
2 / Ptch2 / O35595 / Q9Y6C5* / patched 2*ENSMUSG0000002868119
Ptch1 / Q61115 / Mus musculus patched 1 (Ptch1), transcript variant 2, mRNA. / Q13635* / patched 1*ENSMUSG0000002146618


Protein motifs (from Interpro)
Interpro ID Name
 IPR000731  Sterol-sensing domain
 IPR003392  Protein patched/dispatched


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0097225 sperm midpiece IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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