ENSGALG00000023347


Gallus gallus

Features
Gene ID: ENSGALG00000023347
  
Biological name :PTCHD3
  
Synonyms : patched domain containing 3 / PTCHD3
  
Possible biological names infered from orthology : Q0EEE2 / Q3KNS1
  
Species: Gallus gallus
  
Chr. number: 2
Strand: 1
Band:
Gene start: 15869935
Gene end: 15923124
  
Corresponding Affymetrix probe sets: GgaAffx.4657.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000045216
Ensembl peptide - ENSGALP00000037658
Ensembl peptide - ENSGALP00000050352
NCBI entrez gene - 101750175     See in Manteia.
RefSeq - XM_004949834
swissprot - A0A1D5PC66
swissprot - F1P513
Ensembl - ENSGALG00000023347
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR792422.1ENSDARG00000010075Danio rerio
 si:ch211-250m6.7ENSDARG00000068874Danio rerio
 PTCHD3ENSG00000182077Homo sapiens
 Ptchd3ENSMUSG00000039198Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTCHD1 / patched domain containing 1 / Q14B62* / Q96NR3* / Patched domain-containing protein 1 *ENSGALG0000001635827
NPC1 / NPC intracellular cholesterol transporter 1 / O15118* / O35604* / Niemann-Pick C1 protein *ENSGALG0000001503023
PTCHD4 / patched domain-containing protein 4 / Q6ZW05* / patched domain containing 4* / Mus musculus patched domain containing 4 (Ptchd4), transcript variant 1, mRNA.*ENSGALG0000001672623
PTCH1 / protein patched homolog 1 / Q13635* / Q61115* / patched 1* / Mus musculus patched 1 (Ptch1), transcript variant 2, mRNA.*ENSGALG0000001262021
PTCH2 / patched 2 / 2 * / O35595* / Q9Y6C5*ENSGALG0000001013318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000731  Sterol-sensing domain
 IPR003392  Protein patched/dispatched


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0097225 sperm midpiece IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr