ENSGALG00000016726


Gallus gallus

Features
Gene ID: ENSGALG00000016726
  
Biological name :PTCHD4
  
Synonyms : patched domain-containing protein 4 / PTCHD4
  
Possible biological names infered from orthology : Mus musculus patched domain containing 4 (Ptchd4), transcript variant 1, mRNA. / patched domain containing 4 / Q6ZW05
  
Species: Gallus gallus
  
Chr. number: 3
Strand: -1
Band:
Gene start: 110635977
Gene end: 110720169
  
Corresponding Affymetrix probe sets: Gga.10364.1.S1_at (Chicken Array)   GgaAffx.10701.1.A1_at (Chicken Array)   GgaAffx.10701.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000026940
NCBI entrez gene - 422064     See in Manteia.
RefSeq - NM_001195562
RefSeq - XM_015285145
RefSeq Peptide - NP_001182491
swissprot - E1BW67
Ensembl - ENSGALG00000016726
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptchd4ENSDARG00000008249Danio rerio
 PTCHD4ENSG00000244694Homo sapiens
 Ptchd4ENSMUSG00000042256Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTCHD1 / patched domain containing 1 / Q14B62* / Q96NR3* / Patched domain-containing protein 1 *ENSGALG0000001635850
PTCHD3 / patched domain containing 3 / Q0EEE2* / Q3KNS1*ENSGALG0000002334723
PTCH1 / protein patched homolog 1 / Q13635* / Q61115* / patched 1* / Mus musculus patched 1 (Ptch1), transcript variant 2, mRNA.*ENSGALG0000001262016
NPC1 / NPC intracellular cholesterol transporter 1 / O15118* / O35604* / Niemann-Pick C1 protein *ENSGALG0000001503015
PTCH2 / patched 2 / 2 * / O35595* / Q9Y6C5*ENSGALG0000001013314


Protein motifs (from Interpro)
Interpro ID Name
 IPR000731  Sterol-sensing domain
 IPR003392  Protein patched/dispatched


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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