ENSG00000244694


Homo sapiens

Features
Gene ID: ENSG00000244694
  
Biological name :PTCHD4
  
Synonyms : patched domain containing 4 / PTCHD4 / Q6ZW05
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p12.3
Gene start: 47878028
Gene end: 48068689
  
Corresponding Affymetrix probe sets: 234689_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000341914
Ensembl peptide - ENSP00000381722
NCBI entrez gene - 442213     See in Manteia.
OMIM - 616908
RefSeq - XM_017010896
RefSeq - NM_001013732
RefSeq - NM_207499
RefSeq - XM_017010892
RefSeq - XM_017010893
RefSeq - XM_017010894
RefSeq - XM_017010895
RefSeq - XM_017010891
RefSeq Peptide - NP_001013754
RefSeq Peptide - NP_997382
swissprot - Q6ZW05
swissprot - H0Y3Q6
Ensembl - ENSG00000244694
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptchd4ENSDARG00000008249Danio rerio
 PTCHD4ENSGALG00000016726Gallus gallus
 Ptchd4ENSMUSG00000042256Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTCHD1 / Q96NR3 / patched domain containing 1ENSG0000016518649
NPC1L1 / Q9UHC9 / NPC1 like intracellular cholesterol transporter 1ENSG0000001552018
PTCH1 / Q13635 / patched 1ENSG0000018592017
PTCHD3 / Q3KNS1 / patched domain containing 3ENSG0000018207717
NPC1 / O15118 / NPC intracellular cholesterol transporter 1ENSG0000014145816
PTCH2 / Q9Y6C5 / patched 2ENSG0000011742516


Protein motifs (from Interpro)
Interpro ID Name
 IPR000731  Sterol-sensing domain
 IPR003392  Protein patched/dispatched


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr