ENSGALG00000010133


Gallus gallus

Features
Gene ID: ENSGALG00000010133
  
Biological name :PTCH2
  
Synonyms : patched 2 / PTCH2
  
Possible biological names infered from orthology : 2 / O35595 / Q9Y6C5
  
Species: Gallus gallus
  
Chr. number: 8
Strand: -1
Band:
Gene start: 20869028
Gene end: 20884084
  
Corresponding Affymetrix probe sets: Gga.935.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016460
Ensembl peptide - ENSGALP00000048010
Ensembl peptide - ENSGALP00000046301
NCBI entrez gene - 374187     See in Manteia.
RefSeq - XM_015291070
swissprot - A0A1D5P5N8
swissprot - A0A1D5P0X2
swissprot - F1NBK3
Ensembl - ENSGALG00000010133
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptch2ENSDARG00000055026Danio rerio
 PTCH2ENSG00000117425Homo sapiens
 2 ENSMUSG00000028681Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PTCH1 / protein patched homolog 1 / Q13635* / Q61115* / patched 1* / Mus musculus patched 1 (Ptch1), transcript variant 2, mRNA.*ENSGALG0000001262056
NPC1 / NPC intracellular cholesterol transporter 1 / O15118* / O35604* / Niemann-Pick C1 protein *ENSGALG0000001503017
PTCHD3 / patched domain containing 3 / Q0EEE2* / Q3KNS1*ENSGALG0000002334713
PTCHD1 / patched domain containing 1 / Q14B62* / Q96NR3* / Patched domain-containing protein 1 *ENSGALG0000001635811
PTCHD4 / patched domain-containing protein 4 / Q6ZW05* / patched domain containing 4* / Mus musculus patched domain containing 4 (Ptchd4), transcript variant 1, mRNA.*ENSGALG0000001672610


Protein motifs (from Interpro)
Interpro ID Name
 IPR000731  Sterol-sensing domain
 IPR003392  Protein patched/dispatched
 IPR004766  Transmembrane receptor, patched


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001709 cell fate determination IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008544 epidermis development IEA
 biological_processGO:0009957 epidermal cell fate specification IEA
 biological_processGO:0042633 hair cycle IEA
 biological_processGO:0043588 skin development IEA
 biological_processGO:0045606 positive regulation of epidermal cell differentiation IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005119 smoothened binding IEA
 molecular_functionGO:0008158 hedgehog receptor activity IEA
 molecular_functionGO:0097108 hedgehog family protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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