ENSMUSG00000068240


Mus musculus

Features
Gene ID: ENSMUSG00000068240
  
Biological name :Gm11808
  
Synonyms : Gm11808 / P62984 / predicted gene 11808
  
Possible biological names infered from orthology : P62987 / UBA52 / ubiquitin A-52 residue ribosomal protein fusion product 1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A1
Gene start: 3973092
Gene end: 3973595
  
Corresponding Affymetrix probe sets: 10454805 (MoGene1.0st)   10511342 (MoGene1.0st)   10579302 (MoGene1.0st)   10591208 (MoGene1.0st)   10594904 (MoGene1.0st)   10603009 (MoGene1.0st)   1416624_a_at (Mouse Genome 430 2.0 Array)   1452701_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000086852
NCBI entrez gene - 22186     See in Manteia.
MGI - MGI:3649356
swissprot - P62984
swissprot - Q5M9K3
Ensembl - ENSMUSG00000068240
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 uba52ENSDARG00000041435Danio rerio
 UBA52ENSGALG00000037716Gallus gallus
 UBA52ENSG00000221983Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Uba52 / P62984 / ubiquitin A-52 residue ribosomal protein fusion product 1 / P62987*ENSMUSG00000090137100
Gm5239ENSMUSG0000006274291


Protein motifs (from Interpro)
Interpro ID Name
 IPR000626  Ubiquitin domain
 IPR001975  Ribosomal protein L40e
 IPR019954  Ubiquitin conserved site
 IPR019956  Ubiquitin
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0007623 circadian rhythm TAS
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0043209 myelin sheath IDA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000022111 Uchl3 / Q9JKB1 / ubiquitin carboxyl-terminal esterase L3 (ubiquitin thiolesterase) / P15374* / ubiquitin C-terminal hydrolase L3*  / reaction
 ENSMUSG00000035337 Uchl4 / P58321 / ubiquitin carboxyl-terminal esterase L4 / UCHL3* / P15374* / ubiquitin C-terminal hydrolase L3*  / reaction
 ENSMUSG00000031010 Usp9x / ubiquitin specific peptidase 9, X chromosome / Q93008* / ubiquitin specific peptidase 9, X-linked*  / reaction
 ENSMUSG00000022710 Usp7 / ubiquitin specific peptidase 7 / Q93009*  / reaction






 

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