ENSMUSG00000072878


Mus musculus

Features
Gene ID: ENSMUSG00000072878
  
Biological name :1700123L14Rik
  
Synonyms : 1700123L14Rik / RIKEN cDNA 1700123L14 gene
  
Possible biological names infered from orthology : nucleoporin 50 / NUP50 / Q9UKX7
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: D3
Gene start: 96164497
Gene end: 96166243
  
Corresponding Affymetrix probe sets: 10546551 (MoGene1.0st)   1428486_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000087515
MGI - MGI:1925732
swissprot - Q3V2K7
Ensembl - ENSMUSG00000072878
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup50ENSDARG00000017454Danio rerio
 NUP50ENSGALG00000014222Gallus gallus
 NUP50ENSG00000093000Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nup50 / Q9JIH2 / Nuclear pore complex protein Nup50 / Q9UKX7* / nucleoporin 50*ENSMUSG0000001661956


Protein motifs (from Interpro)
Interpro ID Name
 IPR000156  Ran binding domain
 IPR011993  PH-like domain superfamily
 IPR015007  Nuclear pore complex, NUP2/50/61


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006606 protein import into nucleus IBA
 biological_processGO:0046907 intracellular transport IEA
 cellular_componentGO:0005643 nuclear pore IBA
 molecular_functionGO:0008536 Ran GTPase binding IBA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
Regulation of HSF1-mediated heat shock response
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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