ENSMUSG00000085111


Mus musculus

Features
Gene ID: ENSMUSG00000085111
  
Biological name :Ascl4
  
Synonyms : achaete-scute family bHLH transcription factor 4 / Ascl4
  
Possible biological names infered from orthology : Q6XD76
  
Species: Mus musculus
  
Chr. number: 10
Strand: 1
Band: C1
Gene start: 85927681
Gene end: 85946206
  
Corresponding Affymetrix probe sets: 10365469 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000137650
Ensembl peptide - ENSMUSP00000137794
NCBI entrez gene - 67341     See in Manteia.
MGI - MGI:1914591
RefSeq - NM_001163614
RefSeq Peptide - NP_001157086
swissprot - M0QWE9
swissprot - M0QW46
Ensembl - ENSMUSG00000085111
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ASCL4ENSGALG00000019304Gallus gallus
 ASCL4ENSG00000187855Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ascl5 / achaete-scute family bHLH transcription factor 5 / Q7RTU5*ENSMUSG0000009791840
Ascl3 / Q9JJR7 / Achaete-scute homolog 3 / Q9NQ33* / achaete-scute family bHLH transcription factor 3*ENSMUSG0000003595138
Ascl2 / O35885 / Achaete-scute homolog 2 / Q99929* / achaete-scute family bHLH transcription factor 2*ENSMUSG0000000924838
Ascl1 / Q02067 / Achaete-scute homolog 1 / P50553* / achaete-scute family bHLH transcription factor 1*ENSMUSG0000002005235


Protein motifs (from Interpro)
Interpro ID Name
 IPR011598  Myc-type, basic helix-loop-helix (bHLH) domain
 IPR015660  Achaete-scute transcription factor-related
 IPR036638  Helix-loop-helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex IBA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046983 protein dimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr