ENSMUSG00000091900


Mus musculus

Features
Gene ID: ENSMUSG00000091900
  
Biological name :Gm4353
  
Synonyms : Gm4353 / predicted gene 4353 / Q8R4R6
  
Possible biological names infered from orthology : nucleoporin 35 / NUP35 / Q8NFH5
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F1
Gene start: 116082863
Gene end: 116084635
  
Corresponding Affymetrix probe sets: 10473230 (MoGene1.0st)   10567131 (MoGene1.0st)   1426447_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000107385
MGI - MGI:3782538
swissprot - Q8R4R6
Ensembl - ENSMUSG00000091900
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nup35ENSDARG00000012222Danio rerio
 ENSGALG00000002689Gallus gallus
 NUP35ENSG00000163002Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Nup35 / Q8R4R6 / Nucleoporin NUP53 / Q8NFH5* / nucleoporin 35*ENSMUSG00000026999100


Protein motifs (from Interpro)
Interpro ID Name
 IPR007846  RNA-recognition motif (RRM) Nup35-type domain
 IPR017389  Nucleoporin, NUP53
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 biological_processGO:0006607 NLS-bearing protein import into nucleus IBA
 biological_processGO:0006913 nucleocytoplasmic transport IEA
 biological_processGO:0006999 nuclear pore organization IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0051028 mRNA transport IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005643 nuclear pore IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane ISO
 cellular_componentGO:0044613 nuclear pore central transport channel IBA
 cellular_componentGO:0044615 nuclear pore nuclear basket IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003697 single-stranded DNA binding IBA
 molecular_functionGO:0005543 phospholipid binding IBA
 molecular_functionGO:0042803 protein homodimerization activity IDA


Pathways (from Reactome)
Pathway description
Transport of Mature mRNA derived from an Intron-Containing Transcript
Regulation of Glucokinase by Glucokinase Regulatory Protein
snRNP Assembly
SUMOylation of DNA damage response and repair proteins
SUMOylation of ubiquitinylation proteins
Nuclear Pore Complex (NPC) Disassembly
Regulation of HSF1-mediated heat shock response
SUMOylation of SUMOylation proteins
SUMOylation of chromatin organization proteins
SUMOylation of RNA binding proteins
SUMOylation of DNA replication proteins
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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