ENSMUSG00000116378


Mus musculus

Features
Gene ID: ENSMUSG00000116378
  
Biological name :Gcat
  
Synonyms : Gcat
  
Possible biological names infered from orthology : glycine C-acetyltransferase / O75600
  
Species: Mus musculus
  
Chr. number: 15
Strand: 1
Band: E1
Gene start: 79030901
Gene end: 79042531
  
Corresponding Affymetrix probe sets: 10425211 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000131649
NCBI entrez gene - 26912     See in Manteia.
MGI - MGI:1349389
RefSeq - NM_001161712
RefSeq Peptide - NP_001155184
swissprot - E9PWY6
Ensembl - ENSMUSG00000116378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gcatENSDARG00000005643Danio rerio
 GCATENSGALG00000012312Gallus gallus
 GCATENSG00000100116Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Gcat / O88986 / 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial / O75600* / glycine C-acetyltransferase*ENSMUSG0000000637896
Alas2 / P08680 / 5-aminolevulinate synthase, erythroid-specific, mitochondrial / P22557* / 5-aminolevulinate synthase 2*ENSMUSG0000002527033
Alas1 / Q8VC19 / 5-aminolevulinate synthase, nonspecific, mitochondrial / P13196* / 5-aminolevulinate synthase 1*ENSMUSG0000003278630


Protein motifs (from Interpro)
Interpro ID Name
 IPR001917  Aminotransferase, class-II, pyridoxal-phosphate binding site
 IPR004839  Aminotransferase, class I/classII
 IPR011282  2-amino-3-ketobutyrate coenzyme A ligase
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006567 threonine catabolic process IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009058 biosynthetic process IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0008890 glycine C-acetyltransferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Atg7tm1Tchi/Atg7tm1Tchi,Cnot1tm1Tya/Cnot1tm1Tya,Tg(Ckmm-cre)5Khn/0
Genetic Background: involves: C57BL/6NCrlj * CBA/JNCrlj * FVB

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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