ENSDARG00000005274


Danio rerio

Features
Gene ID: ENSDARG00000005274
  
Biological name :rad52
  
Synonyms : rad52 / RAD52 homolog, DNA repair protein
  
Possible biological names infered from orthology : P43351 / P43352
  
Species: Danio rerio
  
Chr. number: 25
Strand: 1
Band:
Gene start: 21098675
Gene end: 21115213
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000073469
Ensembl peptide - ENSDARP00000016632
NCBI entrez gene - 554171     See in Manteia.
RefSeq - XM_005163057
RefSeq - NM_001024451
RefSeq Peptide - NP_001019622
swissprot - F1RC79
swissprot - F1QXE3
ZFIN ID - ZDB-GENE-050731-10
Ensembl - ENSDARG00000005274
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RAD52ENSGALG00000039171Gallus gallus
 RAD52ENSG00000002016Homo sapiens
 Rad52ENSMUSG00000030166Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007232  DNA repair protein Rad52/59/22


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000724 double-strand break repair via homologous recombination IEA
 biological_processGO:0000730 DNA recombinase assembly IEA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0045002 double-strand break repair via single-strand annealing IMP
 cellular_componentGO:0005634 nucleus IEA


Pathways (from Reactome)
Pathway description
SUMOylation of DNA damage response and repair proteins
HDR through Single Strand Annealing (SSA)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000005274 rad52 / RAD52 homolog, DNA repair protein / P43351* / P43352*  / complex / reaction
 ENSDARG00000007438 ube2ib / Q9W6H5 / ubiquitin-conjugating enzyme E2Ib / UBE2I* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction
 ENSDARG00000044267 sumo1 / Q7SZR5 / small ubiquitin-like modifier 1 / P63166* / P63165* / Small ubiquitin-related modifier 1 *  / complex / reaction
 ENSDARG00000052649 Q9DDJ0 / ube2ia / ubiquitin-conjugating enzyme E2Ia / UBE2I* / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction
 ENSDARG00000041411 rad51 / RAD51 recombinase / Q06609* / Q08297* / AC012476.1* / DNA repair 1 *  / complex / reaction
 ENSDARG00000035187 abl1 / c-abl oncogene 1, non-receptor tyrosine kinase / P00519* / P00520* / ABL proto-oncogene 1, non-receptor tyrosine kinase*  / reaction






 

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