ENSDARG00000007198


Danio rerio

Features
Gene ID: ENSDARG00000007198
  
Biological name :mta1
  
Synonyms : metastasis associated 1 / mta1
  
Possible biological names infered from orthology : Mus musculus metastasis associated 1 (Mta1), transcript variant 2, mRNA. / Q13330 / Q8K4B0
  
Species: Danio rerio
  
Chr. number: 17
Strand: 1
Band:
Gene start: 37510808
Gene end: 37618891
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000045582
Ensembl peptide - ENSDARP00000152737
NCBI entrez gene - 794477     See in Manteia.
swissprot - E7FC29
ZFIN ID - ZDB-GENE-131121-353
Ensembl - ENSDARG00000007198
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MTA1ENSGALG00000002803Gallus gallus
 MTA1ENSG00000182979Homo sapiens
 Mta1ENSMUSG00000021144Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mta3 / metastasis associated 1 family, member 3 / Q924K8* / Q9BTC8* / Metastasis-associated protein MTA3 *ENSDARG0000005490362
mta2 / metastasis associated 1 family, member 2 / O94776* / Q9R190* / Metastasis-associated protein MTA2 *ENSDARG0000001303161
rerea / arginine-glutamic acid dipeptide (RE) repeats a / RERE* / Q80TZ9* / Q9P2R6* / arginine-glutamic acid dipeptide repeats* / Arginine-glutamic acid dipeptide repeats protein *ENSDARG0000007735324
rereb / arginine-glutamic acid dipeptide (RE) repeats b / RERE* / Q80TZ9* / Q9P2R6* / arginine-glutamic acid dipeptide repeats* / Arginine-glutamic acid dipeptide repeats protein *ENSDARG0000007567018
atn1 / atrophin 1 / P54259* / O35126* / Gm45234* / predicted gene 45234*ENSDARG000000920679


Protein motifs (from Interpro)
Interpro ID Name
 IPR000679  Zinc finger, GATA-type
 IPR000949  ELM2 domain
 IPR001005  SANT/Myb domain
 IPR001025  Bromo adjacent homology (BAH) domain
 IPR009057  Homeobox-like domain superfamily
 IPR013088  Zinc finger, NHR/GATA-type
 IPR017884  SANT domain
 IPR035170  Metastasis-associated protein MTA1, R1 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
SUMOylation of transcription factors
RNA Polymerase I Transcription Initiation
Regulation of PTEN gene transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000007438 ube2ib / Q9W6H5 / ubiquitin-conjugating enzyme E2Ib / UBE2I* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction
 ENSDARG00000028119 Q6NV25 / sumo3a / small ubiquitin-like modifier 3a / SUMO3* / Q9Z172* / P55854* / small ubiquitin-like modifier 3*  / reaction
 ENSDARG00000035993 sumo3b / small ubiquitin-like modifier 3b / SUMO3* / P55854* / small ubiquitin-like modifier 3*  / reaction
 ENSDARG00000052649 Q9DDJ0 / ube2ia / ubiquitin-conjugating enzyme E2Ia / UBE2I* / P63280* / P63279* / ubiquitin conjugating enzyme E2 I*  / reaction
 ENSDARG00000102741 sumo2b / Q6DHL4 / small ubiquitin-like modifier 2b / SUMO4* / SUMO2* / Q6EEV6* / P61956* / P61957* / small ubiquitin-like modifier 4* / small ubiquitin-like modifier 2*  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr