ENSDARG00000014215


Danio rerio

Features
Gene ID: ENSDARG00000014215
  
Biological name :cdh13
  
Synonyms : cadherin 13, H-cadherin (heart) / cdh13
  
Possible biological names infered from orthology : cadherin 13 / P55290 / Q9WTR5
  
Species: Danio rerio
  
Chr. number: 18
Strand: 1
Band:
Gene start: 13792490
Gene end: 14134035
  
Corresponding Affymetrix probe sets: Dr.13904.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000116071
Ensembl peptide - ENSDARP00000129926
swissprot - A0A0R4I9W0
swissprot - F1R6D1
ZFIN ID - ZDB-GENE-060503-286
Ensembl - ENSDARG00000014215
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH13ENSGALG00000005483Gallus gallus
 CDH13ENSG00000140945Homo sapiens
 Cdh13ENSMUSG00000031841Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh4 / cadherin 4, type 1, R-cadherin (retinal) / P39038* / P55283* / cadherin 4*ENSDARG0000001500240
cdh2 / cadherin 2, type 1, N-cadherin (neuronal) / P15116* / P19022* / cadherin 2*ENSDARG0000001869340
cdh1 / cdh30 / cadherin 1, type 1, E-cadherin (epithelial) / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010275036
cdh31 / cadherin 31 / CDH1* / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000003579635
cdh28 / cadherin 28 / CDH3* / CDH1* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010433235
cdh30 / cadherin 30 / CDH1* / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010444035
si:dkey-30c15.12 / CDH1* / CDH3* / P10287* / P12830* / P22223* / cadherin 3* / cadherin 1*ENSDARG0000005854632
cdh15 / cadherin 15, type 1, M-cadherin (myotubule) / P33146* / P55291* / cadherin 15*ENSDARG0000006819130
dsc2l / desmocollin 2 like / DSC3* / DSC1* / DSC2* / Q14574* / P55850* / Q02487* / Q08554* / P55292* / P55849* / desmocollin 3* / desmocollin 2* / desmocollin 1*ENSDARG0000003967728
cdh26.1 / cadherin 26, tandem duplicate 1 / CDH26* / Q8IXH8* / P59862* / cadherin 26* / Cadherin-like protein 26 *ENSDARG0000007840428
cdh26.2 / cadherin 26, tandem duplicate 2ENSDARG0000008764128
cdh27 / cadherin 27ENSDARG0000005509327


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR033216  Cadherin-13


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:1902262 apoptotic process involved in blood vessel morphogenesis IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009065 endothelial cell endothelial cell apoptotic process increased occurrence , exacerbated
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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