ENSDARG00000068191


Danio rerio

Features
Gene ID: ENSDARG00000068191
  
Biological name :cdh15
  
Synonyms : cadherin 15, type 1, M-cadherin (myotubule) / cdh15
  
Possible biological names infered from orthology : cadherin 15 / P33146 / P55291
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 56098590
Gene end: 56145671
  
Corresponding Affymetrix probe sets: Dr.2959.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000089224
NCBI entrez gene - 565617     See in Manteia.
RefSeq - NM_212606
RefSeq Peptide - NP_997771
swissprot - E9QEL7
ZFIN ID - ZDB-GENE-030131-780
Ensembl - ENSDARG00000068191
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH15ENSGALG00000030040Gallus gallus
 CDH15ENSG00000129910Homo sapiens
 Cdh15ENSMUSG00000031962Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh4 / cadherin 4, type 1, R-cadherin (retinal) / P39038* / P55283* / cadherin 4*ENSDARG0000001500239
cdh2 / cadherin 2, type 1, N-cadherin (neuronal) / P15116* / P19022* / cadherin 2*ENSDARG0000001869339
cdh1 / cdh30 / cadherin 1, type 1, E-cadherin (epithelial) / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010275035
cdh31 / cadherin 31 / CDH1* / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000003579633
si:dkey-30c15.12 / CDH1* / CDH3* / P10287* / P12830* / P22223* / cadherin 3* / cadherin 1*ENSDARG0000005854630
cdh28 / cadherin 28 / CDH3* / CDH1* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010433227
cdh13 / cadherin 13, H-cadherin (heart) / P55290* / Q9WTR5* / cadherin 13*ENSDARG0000001421525
dsc2l / desmocollin 2 like / DSC3* / DSC1* / DSC2* / Q14574* / P55850* / Q02487* / Q08554* / P55292* / P55849* / desmocollin 3* / desmocollin 2* / desmocollin 1*ENSDARG0000003967725
cdh26.2 / cadherin 26, tandem duplicate 2ENSDARG0000008764125
cdh30 / cadherin 30 / CDH1* / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010444025
cdh27 / cadherin 27ENSDARG0000005509323
cdh26.1 / cadherin 26, tandem duplicate 1 / CDH26* / Q8IXH8* / P59862* / cadherin 26* / Cadherin-like protein 26 *ENSDARG0000007840422


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
CDO in myogenesis
Adherens junctions interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000003 adaxial cell adaxial cell position , abnormal
Show

 ZFA:0009116 slow muscle cell slow muscle cell myofibril bent , abnormal
slow muscle cell myofibril elongated , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000042021 O42376 / mapk12a / mitogen-activated protein kinase 12a / O08911* / MAPK12* / P53778* / mitogen-activated protein kinase 12*  / complex
 ENSDARG00000045836 mapk11 / mitogen-activated protein kinase 11 / Q15759* / Q9WUI1*  / complex
 ENSDARG00000006409 mapk12b / mitogen-activated protein kinase 12b / P53778* / MAPK12* / O08911* / mitogen-activated protein kinase 12*  / complex
 ENSDARG00000028721 mapk14b / mitogen-activated protein kinase 14b / Q16539* / MAPK14* / P47811* / mitogen-activated protein kinase 14*  / complex
 ENSDARG00000000857 Q9DGE2 / mapk14a / mitogen-activated protein kinase 14a / P47811* / Q16539* / MAPK14* / mitogen-activated protein kinase 14*  / complex
 ENSDARG00000013397 bnip2 / BCL2 interacting protein 2 / O54940* / Q12982* / BCL2/adenovirus E1B 19 kDa protein-interacting protein 2 *  / complex
 ENSDARG00000014571 ctnnb1 / catenin (cadherin-associated protein), beta 1 / P35222* / catenin beta 1*  / complex
 ENSDARG00000061328 cdon / cell adhesion associated, oncogene regulated / Q32MD9* / Q4KMG0* / Cell adhesion molecule-related/down-regulated by oncos *  / complex / reaction
 ENSDARG00000068191 cdh15 / cadherin 15, type 1, M-cadherin (myotubule) / P33146* / P55291* / cadherin 15*  / complex
 ENSDARG00000024785 B7ZC77 / ctnna2 / catenin (cadherin-associated protein), alpha 2 / Q61301* / P26232* / catenin alpha 2* / Mus musculus catenin (cadherin associated protein), alpha 2 (Ctnna2), transcript va...  / complex
 ENSDARG00000044573 cdc42 / cell division cycle 42 / P60766* / P60953* / Cell division control *  / complex
 ENSDARG00000102441 ctnna1 / catenin (cadherin-associated protein), alpha 1 / P26231* / P35221* / catenin alpha 1*  / complex
 ENSDARG00000035187 abl1 / c-abl oncogene 1, non-receptor tyrosine kinase / P00519* / P00520* / ABL proto-oncogene 1, non-receptor tyrosine kinase*  / complex






 

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