ENSDARG00000078404


Danio rerio

Features
Gene ID: ENSDARG00000078404
  
Biological name :cdh26.1
  
Synonyms : cadherin 26, tandem duplicate 1 / cdh26.1
  
Possible biological names infered from orthology : cadherin 26 / Cadherin-like protein 26 / CDH26 / P59862 / Q8IXH8
  
Species: Danio rerio
  
Chr. number: 23
Strand: -1
Band:
Gene start: 980001
Gene end: 1017605
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000102644
Ensembl peptide - ENSDARP00000118440
Ensembl peptide - ENSDARP00000148987
NCBI entrez gene - 571792     See in Manteia.
swissprot - E7F370
swissprot - E9QIZ5
ZFIN ID - ZDB-GENE-100922-193
Ensembl - ENSDARG00000078404
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CDH26ENSG00000124215Homo sapiens
 Cdh26ENSMUSG00000039155Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cdh26.2 / cadherin 26, tandem duplicate 2ENSDARG0000008764126
cdh27 / cadherin 27ENSDARG0000005509325
dsc2l / desmocollin 2 like / DSC3* / DSC1* / DSC2* / Q14574* / P55850* / Q02487* / Q08554* / P55292* / P55849* / desmocollin 3* / desmocollin 2* / desmocollin 1*ENSDARG0000003967724
cdh4 / cadherin 4, type 1, R-cadherin (retinal) / P39038* / P55283* / cadherin 4*ENSDARG0000001500222
cdh2 / cadherin 2, type 1, N-cadherin (neuronal) / P15116* / P19022* / cadherin 2*ENSDARG0000001869322
cdh13 / cadherin 13, H-cadherin (heart) / P55290* / Q9WTR5* / cadherin 13*ENSDARG0000001421521
si:dkey-30c15.12 / CDH1* / CDH3* / P10287* / P12830* / P22223* / cadherin 3* / cadherin 1*ENSDARG0000005854621
cdh1 / cdh30 / cadherin 1, type 1, E-cadherin (epithelial) / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010275021
cdh31 / cadherin 31 / CDH1* / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000003579620
cdh15 / cadherin 15, type 1, M-cadherin (myotubule) / P33146* / P55291* / cadherin 15*ENSDARG0000006819120
cdh28 / cadherin 28 / CDH3* / CDH1* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010433220
cdh30 / cadherin 30 / CDH1* / CDH3* / P22223* / P10287* / P12830* / cadherin 3* / cadherin 1*ENSDARG0000010444019


Protein motifs (from Interpro)
Interpro ID Name
 IPR000233  Cadherin, cytoplasmic domain
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR020894  Cadherin conserved site
 IPR027397  Catenin binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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