ENSDARG00000057218


Danio rerio

Features
Gene ID: ENSDARG00000057218
  
Biological name :tbc1d15
  
Synonyms : tbc1d15 / TBC1 domain family, member 15
  
Possible biological names infered from orthology : Q8TC07 / Q9CXF4
  
Species: Danio rerio
  
Chr. number: 18
Strand: -1
Band:
Gene start: 17002164
Gene end: 17020231
  
Corresponding Affymetrix probe sets: Dr.5321.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000111457
NCBI entrez gene - 492676     See in Manteia.
RefSeq - NM_001172625
RefSeq - XM_005159086
RefSeq Peptide - NP_001166096
swissprot - F1QGW7
ZFIN ID - ZDB-GENE-041111-251
Ensembl - ENSDARG00000057218
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D15ENSGALG00000010190Gallus gallus
 Q8TC07ENSG00000121749Homo sapiens
 Q9CXF4ENSMUSG00000020130Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d17 / TBC1 domain family, member 17 / Q8BYH7* / Q9HA65*ENSDARG0000000592744
tbc1d16 / TBC1 domain family, member 16 / Q8TBP0* / Mus musculus TBC1 domain family, member 16 (Tbc1d16), transcript variant 2, mRNA.*ENSDARG0000003699421
tbc1d25 / TBC1 domain family, member 25 / A1A5B6* / Q3MII6*ENSDARG0000007533321
sgsm1a / small G protein signaling modulator 1a / SGSM1* / Q2NKQ1* / small G protein signaling modulator 1*ENSDARG0000002885720
sgsm2 / small G protein signaling modulator 2 / O43147* / Q80U12*ENSDARG0000006330720
sgsm1b / small G protein signaling modulator 1b / SGSM1* / Q8BPQ7* / Q2NKQ1* / small G protein signaling modulator 1*ENSDARG0000007537618
si:dkey-238d18.4ENSDARG0000008897215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR021935  Domain of unknown function DUF3548


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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