ENSDARG00000075376


Danio rerio

Features
Gene ID: ENSDARG00000075376
  
Biological name :sgsm1b
  
Synonyms : sgsm1b / small G protein signaling modulator 1b
  
Possible biological names infered from orthology : Q2NKQ1 / Q8BPQ7 / SGSM1 / small G protein signaling modulator 1
  
Species: Danio rerio
  
Chr. number: 10
Strand: 1
Band:
Gene start: 1638876
Gene end: 1675362
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000145657
Ensembl peptide - ENSDARP00000060945
Ensembl peptide - ENSDARP00000120259
Ensembl peptide - ENSDARP00000155646
swissprot - F1QCN4
swissprot - E7F2K9
ZFIN ID - ZDB-GENE-091117-39
Ensembl - ENSDARG00000075376
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGSM1ENSGALG00000005379Gallus gallus
 SGSM1ENSG00000167037Homo sapiens
 Sgsm1ENSMUSG00000042216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
sgsm1a / small G protein signaling modulator 1a / SGSM1* / Q2NKQ1* / small G protein signaling modulator 1*ENSDARG0000002885766
sgsm2 / small G protein signaling modulator 2 / O43147* / Q80U12*ENSDARG0000006330755
tbc1d17 / TBC1 domain family, member 17 / Q8BYH7* / Q9HA65*ENSDARG0000000592712
tbc1d16 / TBC1 domain family, member 16 / Q8TBP0* / Mus musculus TBC1 domain family, member 16 (Tbc1d16), transcript variant 2, mRNA.*ENSDARG0000003699411
tbc1d15 / TBC1 domain family, member 15 / Q8TC07* / Q9CXF4*ENSDARG0000005721811
tbc1d25 / TBC1 domain family, member 25 / A1A5B6* / Q3MII6*ENSDARG0000007533311
si:dkey-238d18.4ENSDARG000000889727


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR004012  RUN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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