ENSDARG00000062646


Danio rerio

Features
Gene ID: ENSDARG00000062646
  
Biological name :tet3
  
Synonyms : tet3 / tet methylcytosine dioxygenase 3
  
Possible biological names infered from orthology : Mus musculus tet methylcytosine dioxygenase 3 (Tet3), transcript variant 1, mRNA. / O43151 / Q8BG87
  
Species: Danio rerio
  
Chr. number: 5
Strand: -1
Band:
Gene start: 14306475
Gene end: 14373662
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000148501
Ensembl peptide - ENSDARP00000115297
Ensembl peptide - ENSDARP00000145927
NCBI entrez gene - 103283056     See in Manteia.
RefSeq - NM_001327946
RefSeq - NM_001327945
RefSeq - XM_003198607
RefSeq - XM_009301229
RefSeq Peptide - NP_001314875
RefSeq Peptide - NP_001314874
swissprot - A2CEA2
ZFIN ID - ZDB-GENE-060526-109
Ensembl - ENSDARG00000062646
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TET3ENSGALG00000037860Gallus gallus
 TET3ENSG00000187605Homo sapiens
 Tet3ENSMUSG00000034832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tet1 / tet methylcytosine dioxygenase 1 / Q3URK3* / Q8NFU7*ENSDARG0000007523024
tet2 / tet methylcytosine dioxygenase 2 / Q4JK59* / Q6N021* / Mus musculus tet methylcytosine dioxygenase 2 (Tet2), transcript variant 2, mRNA.*ENSDARG0000007692820
cxxc4 / CXXC finger 4 / Q6NXI8* / CXXC finger protein 4* / CXXC-type zinc finger protein 4 *ENSDARG000000778173
cxxc5b / CXXC finger protein 5b / CXXC5* / Q7LFL8* / Q91WA4* / CXXC finger protein 5* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSDARG000000757352
cxxc5a / CXXC finger protein 5a / CXXC5* / Q7LFL8* / Q91WA4* / CXXC finger protein 5* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSDARG000000788652


Protein motifs (from Interpro)
Interpro ID Name
 IPR002857  Zinc finger, CXXC-type
 IPR024779  2OGFeDO, oxygenase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030097 hemopoiesis IGI
 biological_processGO:0045366 regulation of interleukin-13 biosynthetic process IMP
 biological_processGO:0071222 cellular response to lipopolysaccharide IMP
 biological_processGO:0098508 endothelial to hematopoietic transition IGI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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