ENSDARG00000075230


Danio rerio

Features
Gene ID: ENSDARG00000075230
  
Biological name :tet1
  
Synonyms : tet1 / tet methylcytosine dioxygenase 1
  
Possible biological names infered from orthology : Q3URK3 / Q8NFU7
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 18202703
Gene end: 18295928
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000104252
Ensembl peptide - ENSDARP00000117134
NCBI entrez gene - 101883702     See in Manteia.
swissprot - F1QQ36
swissprot - F1R3C6
ZFIN ID - ZDB-GENE-090312-88
Ensembl - ENSDARG00000075230
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TET1ENSGALG00000031604Gallus gallus
 TET1ENSG00000138336Homo sapiens
 Tet1ENSMUSG00000047146Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tet3 / tet methylcytosine dioxygenase 3 / O43151* / Q8BG87* / Mus musculus tet methylcytosine dioxygenase 3 (Tet3), transcript variant 1, mRNA.*ENSDARG0000006264627
tet2 / tet methylcytosine dioxygenase 2 / Q4JK59* / Q6N021* / Mus musculus tet methylcytosine dioxygenase 2 (Tet2), transcript variant 2, mRNA.*ENSDARG0000007692823
cxxc4 / CXXC finger 4 / Q6NXI8* / CXXC finger protein 4* / CXXC-type zinc finger protein 4 *ENSDARG000000778173
cxxc5a / CXXC finger protein 5a / CXXC5* / Q7LFL8* / Q91WA4* / CXXC finger protein 5* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSDARG000000788653
cxxc5b / CXXC finger protein 5b / CXXC5* / Q7LFL8* / Q91WA4* / CXXC finger protein 5* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSDARG000000757352


Protein motifs (from Interpro)
Interpro ID Name
 IPR002857  Zinc finger, CXXC-type
 IPR024779  2OGFeDO, oxygenase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045366 regulation of interleukin-13 biosynthetic process IMP
 biological_processGO:0071222 cellular response to lipopolysaccharide IMP
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr