ENSGALG00000031604


Gallus gallus

Features
Gene ID: ENSGALG00000031604
  
Biological name :TET1
  
Synonyms : TET1 / tet methylcytosine dioxygenase 1
  
Possible biological names infered from orthology : Q3URK3 / Q8NFU7
  
Species: Gallus gallus
  
Chr. number: 6
Strand: 1
Band:
Gene start: 10643048
Gene end: 10718538
  
Corresponding Affymetrix probe sets: GgaAffx.2513.1.S1_at (Chicken Array)   GgaAffx.2516.1.S1_at (Chicken Array)   GgaAffx.2517.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049715
Ensembl peptide - ENSGALP00000053457
Ensembl peptide - ENSGALP00000049959
NCBI entrez gene - 423690     See in Manteia.
RefSeq - XM_015278732
swissprot - A0A1D5PKU4
swissprot - A0A1D5PB39
swissprot - A0A1D5PAF2
Ensembl - ENSGALG00000031604
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tet1ENSDARG00000075230Danio rerio
 TET1ENSG00000138336Homo sapiens
 Tet1ENSMUSG00000047146Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TET2 / tet methylcytosine dioxygenase 2 / Q4JK59* / Q6N021* / Mus musculus tet methylcytosine dioxygenase 2 (Tet2), transcript variant 2, mRNA.*ENSGALG0000001059223
TET3 / tet methylcytosine dioxygenase 3 / O43151* / Q8BG87* / Mus musculus tet methylcytosine dioxygenase 3 (Tet3), transcript variant 1, mRNA.*ENSGALG0000003786023
CXXC5 / CXXC finger protein 5 / Q7LFL8* / Q91WA4* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSGALG000000008843


Protein motifs (from Interpro)
Interpro ID Name
 IPR002857  Zinc finger, CXXC-type
 IPR024779  2OGFeDO, oxygenase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0031062 positive regulation of histone methylation IEA
 biological_processGO:0080111 DNA demethylation IEA
 biological_processGO:0090310 negative regulation of methylation-dependent chromatin silencing IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005506 iron ion binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0070579 methylcytosine dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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