ENSGALG00000000884


Gallus gallus

Features
Gene ID: ENSGALG00000000884
  
Biological name :CXXC5
  
Synonyms : CXXC5 / CXXC finger protein 5
  
Possible biological names infered from orthology : Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA. / Q7LFL8 / Q91WA4
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 1027565
Gene end: 1056195
  
Corresponding Affymetrix probe sets: Gga.2842.1.S1_at (Chicken Array)   Gga.6919.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000001296
NCBI entrez gene - 416138     See in Manteia.
RefSeq - XM_015293549
RefSeq - XM_015293550
swissprot - F1NCW6
Ensembl - ENSGALG00000000884
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cxxc5aENSDARG00000078865Danio rerio
 cxxc5bENSDARG00000075735Danio rerio
 CXXC5ENSG00000171604Homo sapiens
 Cxxc5ENSMUSG00000046668Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TET1 / tet methylcytosine dioxygenase 1 / Q3URK3* / Q8NFU7*ENSGALG0000003160421
TET3 / tet methylcytosine dioxygenase 3 / O43151* / Q8BG87* / Mus musculus tet methylcytosine dioxygenase 3 (Tet3), transcript variant 1, mRNA.*ENSGALG0000003786019
TET2 / tet methylcytosine dioxygenase 2 / Q4JK59* / Q6N021* / Mus musculus tet methylcytosine dioxygenase 2 (Tet2), transcript variant 2, mRNA.*ENSGALG0000001059218


Protein motifs (from Interpro)
Interpro ID Name
 IPR002857  Zinc finger, CXXC-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0008134 transcription factor binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr