ENSGALG00000010592


Gallus gallus

Features
Gene ID: ENSGALG00000010592
  
Biological name :TET2
  
Synonyms : TET2 / tet methylcytosine dioxygenase 2
  
Possible biological names infered from orthology : Mus musculus tet methylcytosine dioxygenase 2 (Tet2), transcript variant 2, mRNA. / Q4JK59 / Q6N021
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 39085986
Gene end: 39107244
  
Corresponding Affymetrix probe sets: Gga.18854.1.S1_s_at (Chicken Array)   GgaAffx.23261.1.S1_s_at (Chicken Array)   GgaAffx.6696.1.A1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000017216
NCBI entrez gene - 422540     See in Manteia.
RefSeq - NM_001277794
RefSeq - XM_015276223
RefSeq - XM_015276224
RefSeq Peptide - NP_001264723
swissprot - F1NJ90
Ensembl - ENSGALG00000010592
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tet2ENSDARG00000076928Danio rerio
 TET2ENSG00000168769Homo sapiens
 Tet2ENSMUSG00000040943Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TET1 / tet methylcytosine dioxygenase 1 / Q3URK3* / Q8NFU7*ENSGALG0000003160425
TET3 / tet methylcytosine dioxygenase 3 / O43151* / Q8BG87* / Mus musculus tet methylcytosine dioxygenase 3 (Tet3), transcript variant 1, mRNA.*ENSGALG0000003786024
CXXC5 / CXXC finger protein 5 / Q7LFL8* / Q91WA4* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSGALG000000008843


Protein motifs (from Interpro)
Interpro ID Name
 IPR024779  2OGFeDO, oxygenase domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006211 5-methylcytosine catabolic process IEA
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0030099 myeloid cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:0080111 DNA demethylation IEA
 biological_processGO:0080182 histone H3-K4 trimethylation IEA
 molecular_functionGO:0008198 ferrous iron binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0070579 methylcytosine dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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