ENSGALG00000037860


Gallus gallus
pronucleusTET3domaindnademethylationmaleogfedooxygenasep-loopcontainingnucleosidetriphosphatehydrolasedeoxynucleosidekinaseproteino-linkedglycosylationregulationtranscriptionrnapolymeraseiihistoneh-ktrimethylationfemalenucleuscytoplasmmethylcytosine

Features
Gene ID: ENSGALG00000037860
  
Biological name :TET3
  
Synonyms : TET3 / tet methylcytosine dioxygenase 3
  
Possible biological names infered from orthology : Mus musculus tet methylcytosine dioxygenase 3 (Tet3), transcript variant 1, mRNA. / O43151 / Q8BG87
  
Species: Gallus gallus
  
Chr. number: 22
Strand: 1
Band:
Gene start: 2848252
Gene end: 2874073
  
Corresponding Affymetrix probe sets: GgaAffx.8029.1.S1_at (Chicken Array)   GgaAffx.8564.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000043681
Ensembl peptide - ENSGALP00000058639
Ensembl peptide - ENSGALP00000052142
Ensembl peptide - ENSGALP00000050549
NCBI entrez gene - 425829     See in Manteia.
RefSeq - XM_015297468
swissprot - A0A1L1RIR7
swissprot - A0A1D5PH65
swissprot - A0A1D5PCQ8
swissprot - A0A1D5NTM4
Ensembl - ENSGALG00000037860
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tet3ENSDARG00000062646Danio rerio
 TET3ENSG00000187605Homo sapiens
 Tet3ENSMUSG00000034832Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TET1 / tet methylcytosine dioxygenase 1 / Q3URK3* / Q8NFU7*ENSGALG0000003160432
TET2 / tet methylcytosine dioxygenase 2 / Q4JK59* / Q6N021* / Mus musculus tet methylcytosine dioxygenase 2 (Tet2), transcript variant 2, mRNA.*ENSGALG0000001059231
CXXC5 / CXXC finger protein 5 / Q7LFL8* / Q91WA4* / Mus musculus CXXC finger 5 (Cxxc5), transcript variant 2, mRNA.*ENSGALG000000008843


Protein motifs (from Interpro)
Interpro ID Name
 IPR024779  2OGFeDO, oxygenase domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR031314  Deoxynucleoside kinase domain


Gene Ontology (GO)
nitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen compound metabolic processbiosynthetic processcellular metabolic processprimary metabolic processorganic substance metabolic processglycosylationmethylationanatomical structure developmentdemethylationcellular component organizationnitrogen componitrogen compound metabolic processbiosynthetic pbiosynthetic processcellular metabcellular metabolic processprimary metaboprimary metabolic processorganic substaorganic substance metabolic processglycosylationglycosylationmethylationmethylationanatomical stranatomical structure developmentdemethylationdemethylationcellular compocellular component organization
oxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activityoxidoreductase activity
cellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellorganellecellcellorganelleorganelle
TypeGO IDTermEv.Code
 biological_processGO:0006493 protein O-linked glycosylation IEA
 biological_processGO:0044727 DNA demethylation of male pronucleus IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0080111 DNA demethylation IEA
 biological_processGO:0080182 histone H3-K4 trimethylation IEA
 cellular_componentGO:0001939 female pronucleus IEA
 cellular_componentGO:0001940 male pronucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0070579 methylcytosine dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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