ENSDARG00000063347


Danio rerio

Features
Gene ID: ENSDARG00000063347
  
Biological name :si:ch211-173d10.1
  
Synonyms : si:ch211-173d10.1
  
Possible biological names infered from orthology : Q7TN37 / Q8TD43 / transient receptor potential cation channel subfamily M member 4 / TRPM4
  
Species: Danio rerio
  
Chr. number: 12
Strand: -1
Band:
Gene start: 4396308
Gene end: 4435303
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140015
Ensembl peptide - ENSDARP00000126648
Ensembl peptide - ENSDARP00000127011
NCBI entrez gene - 102659286     See in Manteia.
RefSeq - NM_001328032
RefSeq Peptide - NP_001314961
swissprot - A0A0R4IWS9
swissprot - R4GDU1
swissprot - R4GEU8
swissprot - S5TZ97
ZFIN ID - ZDB-GENE-121214-115
Ensembl - ENSDARG00000063347
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRPM4ENSG00000130529Homo sapiens
 Trpm4ENSMUSG00000038260Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpm4b.2 / transient receptor potential cation channel, subfamily M, member 4b, transient receptor potential cation channel, subfamily M, member 4b, tandem duplicate 2 / TRPM4* / Q8TD43* / ...ENSDARG0000006343586
trpm4a / transient receptor potential cation channel, subfamily M, member 4a / TRPM4* / Q7TN37* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000005999355
trpm5 / transient receptor potential cation channel, subfamily M, member 5 / Q9JJH7* / Q9NZQ8*ENSDARG0000005979238
si:ch211-173d10.1 / TRPM4* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000010944238
trpm2 / transient receptor potential cation channel, subfamily M, member 2 / O94759* / Q91YD4*ENSDARG0000010164133
trpm1a / transient receptor potential cation channel, subfamily M, member 1a / TRPM1* / Q2TV84* / Q7Z4N2* / transient receptor potential cation channel subfamily M member 1*ENSDARG0000001125926
trpm3 / transient receptor potential cation channel, subfamily M, member 3 / Q9HCF6*ENSDARG0000003918126
trpm1b / transient receptor potential cation channel, subfamily M, member 1b / TRPM1* / Q7Z4N2* / transient receptor potential cation channel subfamily M member 1*ENSDARG0000010347625
trpm7 / transient receptor potential cation channel, subfamily M, member 7 / Q923J1* / Q96QT4*ENSDARG0000003623223
trpm6 / transient receptor potential cation channel, subfamily M, member 6 / Q9BX84*ENSDARG0000010345423


Protein motifs (from Interpro)
Interpro ID Name
 IPR005821  Ion transport domain
 IPR029581  Transient receptor potential cation channel subfamily M member 4


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002724 regulation of T cell cytokine production IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0042310 vasoconstriction IEA
 biological_processGO:0042391 regulation of membrane potential IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0061337 cardiac conduction IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005227 calcium activated cation channel activity IEA


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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