ENSDARG00000103454


Danio rerio

Features
Gene ID: ENSDARG00000103454
  
Biological name :trpm6
  
Synonyms : transient receptor potential cation channel, subfamily M, member 6 / trpm6
  
Possible biological names infered from orthology : Q8CIR4 / Q9BX84
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 25317061
Gene end: 25358683
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132448
NCBI entrez gene - 100149353     See in Manteia.
RefSeq - NM_001251831
RefSeq Peptide - NP_001238760
swissprot - A0A0G2KJE9
ZFIN ID - ZDB-GENE-111212-1
Ensembl - ENSDARG00000103454
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TRPM6ENSGALG00000015154Gallus gallus
 TRPM6ENSG00000119121Homo sapiens
 Trpm6ENSMUSG00000024727Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
trpm7 / transient receptor potential cation channel, subfamily M, member 7 / Q923J1* / Q96QT4*ENSDARG0000003623240
trpm3 / transient receptor potential cation channel, subfamily M, member 3 / Q9HCF6*ENSDARG0000003918132
trpm1a / transient receptor potential cation channel, subfamily M, member 1a / TRPM1* / Q2TV84* / Q7Z4N2* / transient receptor potential cation channel subfamily M member 1*ENSDARG0000001125928
trpm1b / transient receptor potential cation channel, subfamily M, member 1b / TRPM1* / Q7Z4N2* / transient receptor potential cation channel subfamily M member 1*ENSDARG0000010347628
trpm2 / transient receptor potential cation channel, subfamily M, member 2 / O94759* / Q91YD4*ENSDARG0000010164118
trpm4a / transient receptor potential cation channel, subfamily M, member 4a / TRPM4* / Q7TN37* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000005999316
trpm4b.2 / transient receptor potential cation channel, subfamily M, member 4b, transient receptor potential cation channel, subfamily M, member 4b, tandem duplicate 2 / TRPM4* / Q8TD43* / ...ENSDARG0000006343516
si:ch211-173d10.1 / TRPM4* / Q7TN37* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG0000006334715
trpm5 / transient receptor potential cation channel, subfamily M, member 5 / Q9JJH7* / Q9NZQ8*ENSDARG0000005979214
si:ch211-173d10.1 / TRPM4* / Q8TD43* / transient receptor potential cation channel subfamily M member 4*ENSDARG000001094428


Protein motifs (from Interpro)
Interpro ID Name
 IPR004166  MHCK/EF2 kinase
 IPR005821  Ion transport domain
 IPR011009  Protein kinase-like domain superfamily
 IPR029597  Transient receptor potential cation channel subfamily M member 6
 IPR032415  TRPM, tetramerisation domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006812 cation transport IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0051262 protein tetramerization IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0098655 cation transmembrane transport IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005261 cation channel activity IEA


Pathways (from Reactome)
Pathway description
TRP channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0009149 Mauthner neuron Mauthner neuron action potential , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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