ENSDARG00000079468


Danio rerio

Features
Gene ID: ENSDARG00000079468
  
Biological name :rhobtb1
  
Synonyms : rhobtb1 / Rho-related BTB domain containing 1
  
Possible biological names infered from orthology : O94844 / Q9DAK3 / Rho-related BTB domain-containing protein 1
  
Species: Danio rerio
  
Chr. number: 12
Strand: 1
Band:
Gene start: 8003872
Gene end: 8039095
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000106826
Ensembl peptide - ENSDARP00000156491
NCBI entrez gene - 100537290     See in Manteia.
swissprot - E7FDG6
ZFIN ID - ZDB-GENE-130530-871
Ensembl - ENSDARG00000079468
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RHOBTB1ENSGALG00000003073Gallus gallus
 O94844ENSG00000072422Homo sapiens
 Q9DAK3ENSMUSG00000019944Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rhobtb2a / Rho-related BTB domain containing 2aENSDARG0000001686868
rhobtb2b / Rho-related BTB domain containing 2bENSDARG0000008934068
si:dkey-263f15.2ENSDARG0000007482849
CABZ01060030.1ENSDARG0000010657915
si:ch211-1f22.1 / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*ENSDARG0000001320312
rac3b / Rac family small GTPase 3b / RAC3* / P60764* / P60763* / Rac family small GTPase 3* / RAS-related C3 botulinum substrate 3*ENSDARG0000002079512
rac2 / Rac family small GTPase 2 / P15153* / Q05144* / Ras-related C3 botulinum toxin substrate 2 *ENSDARG0000003801012
cdc42l / cell division cycle 42, likeENSDARG0000004015812
rac1a / Rac family small GTPase 1a / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*ENSDARG0000007484912
rac1b / Rac family small GTPase 1b / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*ENSDARG0000008795412
rac3a / Rac family small GTPase 3a / RAC3* / P60763* / Rac family small GTPase 3*ENSDARG0000009006212
rhogb / ras homolog family member Gb / RHOG* / P84095* / P84096* / ras homolog family member G*ENSDARG0000000430111
rhoub / ras homolog family member UbENSDARG0000001296811
rhoua / ras homolog family member Ua / RHOU* / Q9EQT3* / Q7L0Q8* / ras homolog family member U* / Rho-related GTP-binding protein RhoU *ENSDARG0000001970911
rhogc / ras homolog gene family, member GcENSDARG0000002840111
rhogd / ras homolog gene family, member GdENSDARG0000003060811
cdc42 / cell division cycle 42 / P60766* / P60953* / Cell division control *ENSDARG0000004457311
rac1l / Rac family small GTPase 1, like / RAC1* / P63001* / P63000* / Rac family small GTPase 1* / RAS-related C3 botulinum substrate 1*ENSDARG0000005464911
RHOU (1 of many) / si:ch211-133l11.10 / RHOU* / Q9EQT3* / Q7L0Q8* / ras homolog family member U* / Rho-related GTP-binding protein RhoU *ENSDARG0000000562610
rhoj / ras homolog family member J / Q9ER71* / Q9H4E5*ENSDARG0000002025010


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR001806  Small GTPase superfamily
 IPR003578  Small GTPase superfamily, Rho type
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007264 small GTPase mediated signal transduction IEA
 cellular_componentGO:0005622 intracellular IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003924 GTPase activity IEA
 molecular_functionGO:0005525 GTP binding IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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