ENSDARG00000091059


Danio rerio

Features
Gene ID: ENSDARG00000091059
  
Biological name :onecut3b
  
Synonyms : onecut3b / one cut homeobox 3b
  
Possible biological names infered from orthology : O60422 / ONECUT3 / One cut domain family member 3 / one cut homeobox 3 / Q8K557
  
Species: Danio rerio
  
Chr. number: 2
Strand: 1
Band:
Gene start: 57504073
Gene end: 57563888
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000110548
NCBI entrez gene - 100332965     See in Manteia.
swissprot - E7F8J9
ZFIN ID - ZDB-GENE-130805-1
Ensembl - ENSDARG00000091059
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ONECUT3ENSGALG00000028081Gallus gallus
 O60422ENSG00000205922Homo sapiens
 Q8K557ENSMUSG00000045518Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
onecut3a / one cut homeobox 3a / Q8K557* / O60422* / ONECUT3* / one cut homeobox 3* / One cut domain family member 3 *ENSDARG0000005639583
onecut2 / one cut homeobox 2 / O95948* / Q6XBJ3* / One cut domain family member 2 *ENSDARG0000009038767
onecut1 / one cut homeobox 1ENSDARG0000000798264
onecutl / one cut domain, family member, likeENSDARG0000004025348
cux1a / cut-like homeobox 1aENSDARG0000007845925
cux2b / cut-like homeobox 2b / CUX2* / P70298* / O14529* / cut like homeobox 2* / Homeobox protein cut-like 2 *ENSDARG0000008634522
cux1b / cut-like homeobox 1bENSDARG000000431348


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003350  CUT domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0048731 system development IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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