ENSDARG00000086345


Danio rerio

Features
Gene ID: ENSDARG00000086345
  
Biological name :cux2b
  
Synonyms : cut-like homeobox 2b / cux2b
  
Possible biological names infered from orthology : cut like homeobox 2 / CUX2 / Homeobox protein cut-like 2 / O14529 / P70298
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 4044578
Gene end: 4327473
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000118737
Ensembl peptide - ENSDARP00000120983
Ensembl peptide - ENSDARP00000122772
swissprot - F1QKQ1
swissprot - F1QM72
swissprot - F1QSD0
ZFIN ID - ZDB-GENE-081104-176
Ensembl - ENSDARG00000086345
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CUX2ENSGALG00000004598Gallus gallus
 CUX2ENSG00000111249Homo sapiens
 Cux2ENSMUSG00000042589Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
cux1a / cut-like homeobox 1aENSDARG0000007845939
cux1b / cut-like homeobox 1bENSDARG0000004313411
onecut1 / one cut homeobox 1ENSDARG000000079827
onecutl / one cut domain, family member, likeENSDARG000000402537
onecut3a / one cut homeobox 3a / Q8K557* / O60422* / ONECUT3* / one cut homeobox 3* / One cut domain family member 3 *ENSDARG000000563957
onecut2 / one cut homeobox 2 / O95948* / Q6XBJ3* / One cut domain family member 2 *ENSDARG000000903877
onecut3b / one cut homeobox 3b / O60422* / ONECUT3* / one cut homeobox 3*ENSDARG000000910597


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR003350  CUT domain
 IPR009057  Homeobox-like domain superfamily
 IPR010982  Lambda repressor-like, DNA-binding domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0048193 Golgi vesicle transport IBA
 cellular_componentGO:0000139 Golgi membrane IBA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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