ENSDARG00000092644


Danio rerio

Features
Gene ID: ENSDARG00000092644
  
Biological name :ago1
  
Synonyms : ago1 / argonaute RISC catalytic component 1
  
Possible biological names infered from orthology : argonaute 1, RISC catalytic component / Protein argonaute-1 / Q8CJG1 / Q9UL18
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 51084472
Gene end: 51151993
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000129194
NCBI entrez gene - 570775     See in Manteia.
RefSeq - NM_001317223
RefSeq Peptide - NP_001304152
swissprot - X1WG39
ZFIN ID - ZDB-GENE-110606-3
Ensembl - ENSDARG00000092644
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AGO1ENSGALG00000002249Gallus gallus
 AGO1ENSG00000092847Homo sapiens
 Ago1ENSMUSG00000041530Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ago3a / argonaute RISC catalytic component 3a / AGO3* / Q9H9G7* / argonaute 3, RISC catalytic component*ENSDARG0000005988884
ago3b / A3KPK0 / argonaute RISC catalytic component 3b / AGO3* / Q8CJF9* / Q9H9G7* / Protein argonaute-3 * / argonaute 3, RISC catalytic component*ENSDARG0000006307984
ago4 / argonaute RISC catalytic component 4 / Q9HCK5* / argonaute 4, RISC catalytic component*ENSDARG0000010085483
ago2 / argonaute RISC catalytic component 2 / Q8CJG0* / Q9UKV8* / Protein argonaute-2 * / argonaute 2, RISC catalytic component*ENSDARG0000006126881
piwil1 / Q8UVX0 / piwi-like RNA-mediated gene silencing 1 / Q96J94* / Q9JMB7* / Piwi-like protein 1 *ENSDARG0000004169923
piwil2 / A2CEI6 / piwi-like RNA-mediated gene silencing 2 / Q8TC59* / Q8CDG1* / Piwi-like protein 2 *ENSDARG0000006260120


Protein motifs (from Interpro)
Interpro ID Name
 IPR003100  PAZ domain
 IPR003165  Piwi domain
 IPR012337  Ribonuclease H-like superfamily
 IPR014811  Argonaute, linker 1 domain
 IPR032472  Argonaute linker 2 domain
 IPR032473  Protein argonaute, Mid domain
 IPR032474  Protein argonaute, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0031047 gene silencing by RNA IEA
 molecular_functionGO:0003676 nucleic acid binding IEA


Pathways (from Reactome)
Pathway description
MicroRNA (miRNA) biogenesis
Small interfering RNA (siRNA) biogenesis
Post-transcriptional silencing by small RNAs
Transcriptional regulation by small RNAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000015829 mov10a / Mov10 RISC complex RNA helicase a / MOV10* / Q9HCE1* / Mov10 RISC complex RNA helicase*  / complex
 ENSDARG00000061177 Q1LXK4 / mov10b.1 / Moloney leukemia virus 10b, tandem duplicate 1 / MOV10* / Q9HCE1* / P23249* / Putative helicase MOV-10 * / Mov10 RISC complex RNA helicase*  / complex
 ENSDARG00000056065 Q1LXK5 / mov10b.2 / Moloney leukemia virus 10b, tandem duplicate 2 / MOV10* / Q9HCE1* / P23249* / Putative helicase MOV-10 * / Mov10 RISC complex RNA helicase*  / complex
 ENSDARG00000076847 tnrc6c1 / trinucleotide repeat containing 6C1 / Q9HCJ0* / TNRC6C* / trinucleotide repeat containing 6C*  / complex
 ENSDARG00000068436 Q6PI20 / h3f3b.1 / H3 histone, family 3B.1 / H3F3B* / H3F3C* / P84243* / Q6NXT2* / H3 histone family member 3C* / H3 histone family member 3B*  / complex / reaction
 ENSDARG00000103851 tnrc6c2 / trinucleotide repeat containing 6C2 / Q9HCJ0* / TNRC6C* / trinucleotide repeat containing 6C*  / complex
 ENSDARG00000105345 zgc:173552  / complex / reaction
 ENSDARG00000105359 Q4QRF4 / FP325123.1 / Histone H3.2   / complex / reaction






 

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