ENSDARG00000098317


Danio rerio

Features
Gene ID: ENSDARG00000098317
  
Biological name :dync1li1
  
Synonyms : dync1li1 / dynein, cytoplasmic 1, light intermediate chain 1
  
Possible biological names infered from orthology : Cytoplasmic dynein 1 light intermediate chain 1 / Q8R1Q8 / Q9Y6G9
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 18989911
Gene end: 19026028
  
Corresponding Affymetrix probe sets: Dr.12889.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000157060
Ensembl peptide - ENSDARP00000132385
Ensembl peptide - ENSDARP00000138705
NCBI entrez gene - 556103     See in Manteia.
RefSeq - XM_009294160
RefSeq - XM_009294161
RefSeq - NM_001102428
RefSeq - XM_005159514
RefSeq Peptide - NP_001095898
swissprot - Q1LUM9
swissprot - A0A0R4ICI6
ZFIN ID - ZDB-GENE-030131-4108
Ensembl - ENSDARG00000098317
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q90828ENSGALG00000011491Gallus gallus
 Q9Y6G9ENSG00000144635Homo sapiens
 Q8R1Q8ENSMUSG00000032435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dync1li2 / dynein, cytoplasmic 1, light intermediate chain 2 / O43237* / Q6PDL0* / Cytoplasmic dynein 1 light intermediate chain 2 *ENSDARG0000003592461


Protein motifs (from Interpro)
Interpro ID Name
 IPR008467  Dynein 1 light intermediate chain
 IPR022780  Dynein family light intermediate chain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007018 microtubule-based movement IEA
 biological_processGO:0009794 regulation of mitotic cell cycle, embryonic IMP
 biological_processGO:0060236 regulation of mitotic spindle organization IMP
 cellular_componentGO:0005813 centrosome IBA
 cellular_componentGO:0005868 cytoplasmic dynein complex IEA
 molecular_functionGO:0003777 microtubule motor activity IEA
 molecular_functionGO:0045504 dynein heavy chain binding IBA


Pathways (from Reactome)
Pathway description
Amplification of signal from unattached kinetochores via a MAD2 inhibitory signal
Separation of Sister Chromatids
Resolution of Sister Chromatid Cohesion
RHO GTPases Activate Formins
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001175 blastodisc blastodisc furrowed , abnormal
Show

 ZFA:0009000 cell cell mitotic spindle elongated , abnormal
cell mitotic spindle pole broken , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000035924 dync1li2 / dynein, cytoplasmic 1, light intermediate chain 2 / O43237* / Q6PDL0* / Cytoplasmic dynein 1 light intermediate chain 2 *  / complex
 ENSDARG00000058454 dynll1 / dynein, light chain, LC8-type 1 / P63168* / P63167* / BC048507* / cDNA sequence BC048507* / Dynein light chain 1, cytoplasmic *  / complex
 ENSDARG00000069790 dynll2a / dynein, light chain, LC8-type 2a / Q9D0M5* / DYNLL2* / Q96FJ2* / dynein light chain LC8-type 2* / Dynein light chain 2, cytoplasmic *  / complex
 ENSDARG00000056090 capza1b / capping protein (actin filament) muscle Z-line, alpha 1b / P52907* / CAPZA1* / 4933400A11Rik* / RIKEN cDNA 4933400A11 gene* / capping actin protein of muscle Z-line alpha subunit 1*  / complex
 ENSDARG00000041363 dctn3 / dynactin 3 (p22) / O75935* / Q9Z0Y1* / dynactin subunit 3*  / complex
 ENSDARG00000060948 dync1i1 / dynein, cytoplasmic 1, intermediate chain 1 / O14576* / O88485* / Cytoplasmic dynein 1 intermediate chain 1 *  / complex
 ENSDARG00000056753 dctn1b / dynactin 1b / DCTN1* / O08788* / Q14203* / dynactin subunit 1* / Mus musculus dynactin 1 (Dctn1), transcript variant 4, mRNA.*  / complex
 ENSDARG00000019743 dctn1a / dynactin 1a / DCTN1* / Q14203* / dynactin subunit 1*  / complex
 ENSDARG00000098317 dync1li1 / dynein, cytoplasmic 1, light intermediate chain 1 / Q8R1Q8* / Q9Y6G9* / Cytoplasmic dynein 1 light intermediate chain 1 *  / complex
 ENSDARG00000100252 capzb / capping protein (actin filament) muscle Z-line, beta / P47756* / capping actin protein of muscle Z-line beta subunit*  / complex






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr