ENSDARG00000102430


Danio rerio

Features
Gene ID: ENSDARG00000102430
  
Biological name :opn6a
  
Synonyms : opn6a / opsin 6, group member a
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 11
Strand: -1
Band:
Gene start: 44858979
Gene end: 44876005
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132491
Ensembl peptide - ENSDARP00000156907
NCBI entrez gene - 780836     See in Manteia.
swissprot - A0PJR8
ZFIN ID - ZDB-GENE-061201-30
Ensembl - ENSDARG00000102430
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ENSGALG00000027624Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
opn6b / opsin 6, group member bENSDARG0000009805145
opn5 / opsin 5 / Q6U736* / Q6VZZ7*ENSDARG0000007011024
rrh / retinal pigment epithelium-derived rhodopsin homolog / O14718* / O35214*ENSDARG0000003953423
opn9 / opsin 9ENSDARG0000010423123
opn7b / opsin 7, group member bENSDARG0000011658423
opn7a / opsin 7, group member aENSDARG0000002420822
opn3 / opsin 3 / Q9H1Y3* / Q9WUK7*ENSDARG0000005277522
opn7d / opsin 7, group member dENSDARG0000006812422
valopa / vertebrate ancient long opsin aENSDARG0000002115021
opn7c / opsin 7, group member cENSDARG0000003086721
opn8c / opsin 8, group member cENSDARG0000004347921
tmtops3a / teleost multiple tissue opsin 3aENSDARG0000003646020
valopb / vertebrate ancient long opsin bENSDARG0000005418120
Q9W6A6 / opn1mw4 / opsin 1 (cone pigments), medium-wave-sensitive, 4ENSDARG0000000063819
tmtops2b / teleost multiple tissue opsin 2bENSDARG0000002782219
Q8AYM7 / opn1mw3 / opsin 1 (cone pigments), medium-wave-sensitive, 3ENSDARG0000004427919
tmtops2a / teleost multiple tissue opsin 2aENSDARG0000006151519
opn8b / opsin 8, group member bENSDARG0000007904519
opn8a / opsin 8, group member aENSDARG0000008618619
opn4.1 / Q1JPS6 / opsin 4.1 / OPN4* / Q9UHM6* / Q9QXZ9* / opsin 4* / Melanopsin *ENSDARG0000000755318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR017452  GPCR, rhodopsin-like, 7TM


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007602 phototransduction IDA
 biological_processGO:0009584 detection of visible light IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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