ENSDARG00000030867


Danio rerio
activityopn7creceptorg-proteincoupledphotoreceptorrhodopsin-likevisualsignalmembranegprotein-coupledperopsingpcrtmpigmentsopsinsretinalbindingsitetransductionsignalingpathwayperceptiondetectionvisiblelightprotein-chromophorelinkageresponsestimulus

Features
Gene ID: ENSDARG00000030867
  
Biological name :opn7c
  
Synonyms : opn7c / opsin 7, group member c
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 25858224
Gene end: 25874426
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000117743
NCBI entrez gene - 562695     See in Manteia.
RefSeq - NM_001044992
RefSeq Peptide - NP_001038457
swissprot - Q1LVD8
ZFIN ID - ZDB-GENE-060526-333
Ensembl - ENSDARG00000030867
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
opn7d / opsin 7, group member dENSDARG0000006812473
opn7b / opsin 7, group member bENSDARG0000011658459
opn7a / opsin 7, group member aENSDARG0000002420849
opn9 / opsin 9ENSDARG0000010423128
opn5 / opsin 5 / Q6U736* / Q6VZZ7*ENSDARG0000007011027
opn8a / opsin 8, group member aENSDARG0000008618625
opn8b / opsin 8, group member bENSDARG0000007904524
opn8c / opsin 8, group member cENSDARG0000004347923
opn4.1 / Q1JPS6 / opsin 4.1 / OPN4* / Q9UHM6* / Q9QXZ9* / opsin 4* / Melanopsin *ENSDARG0000000755322
parapinopsinb / parapinopsin bENSDARG0000004467222
opn6a / opsin 6, group member aENSDARG0000010243022
opn4xb / opsin 4xbENSDARG0000010325922
tmtops3a / teleost multiple tissue opsin 3aENSDARG0000003646021
opn4b / opsin 4b / OPN4* / Q9UHM6* / opsin 4*ENSDARG0000005392921
opn4xa / opsin 4xaENSDARG0000007912921
tmtops3b / teleost multiple tissue opsin 3bENSDARG0000009062921
opn6b / opsin 6, group member bENSDARG0000009805121
Q9W6A6 / opn1mw4 / opsin 1 (cone pigments), medium-wave-sensitive, 4ENSDARG0000000063820
opn4a / opsin 4a (melanopsin) / OPN4* / Q9UHM6* / Q9QXZ9* / opsin 4* / Melanopsin *ENSDARG0000002209820
tmtops2b / teleost multiple tissue opsin 2bENSDARG0000002782220


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002962  Peropsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
cell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicationcellular response to stimulussystem processresponse to external stimulusdetection of stimulusresponse to abiotic stimulusnitrogen compound metabolic processcellular metabolic processprimary metabolic processorganic substance metabolic processcell communicacell communicationcellular respocellular response to stimulussystem processsystem processresponse to exresponse to external stimulusdetection of sdetection of stimulusresponse to abresponse to abiotic stimulusnitrogen componitrogen compound metabolic processcellular metabcellular metabolic processprimary metaboprimary metabolic processorganic substaorganic substance metabolic process
signaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activitysignaling receptor activity
cellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellorganellemembranecellcellorganelleorganellemembranemembrane
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2025
contact: otassy@igbmc.fr