Manteia

ENSDARG00000044672

Danio rerio

Features

Gene ID:	ENSDARG00000044672

Biological name :	parapinopsinb

Synonyms :	parapinopsin b / parapinopsinb

Possible biological names infered from orthology :

Species:	Danio rerio

Chr. number:	11
Strand:	1
Band:
Gene start:	36777613
Gene end:	36788797

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000141859 Ensembl peptide - ENSDARP00000065643 NCBI entrez gene - 368725 See in Manteia. RefSeq - NM_001005312 RefSeq Peptide - NP_001005312 swissprot - A0A0R4IYG7 swissprot - Q8JFR3 ZFIN ID - ZDB-GENE-030616-134 Ensembl - ENSDARG00000044672

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name

Species

No match

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
parapinopsina / parapinopsin a	ENSDARG00000116976	56
valopa / vertebrate ancient long opsin a	ENSDARG00000021150	39
valopb / vertebrate ancient long opsin b	ENSDARG00000054181	38
Q9W6A8 / opn1sw2 / opsin 1 (cone pigments), short-wave-sensitive 2	ENSDARG00000017274	36
rhol / rhodopsin, like / RHO* / P15409* / P08100* / rhodopsin*	ENSDARG00000070666	36
rho / P35359 / rhodopsin / P08100*	ENSDARG00000002193	35
parietopsin	ENSDARG00000052056	35
Q9W6A6 / opn1mw4 / opsin 1 (cone pigments), medium-wave-sensitive, 4	ENSDARG00000000638	34
Q8AYM7 / opn1mw3 / opsin 1 (cone pigments), medium-wave-sensitive, 3	ENSDARG00000044279	34
Q8AYN0 / opn1lw2 / opsin 1 (cone pigments), long-wave-sensitive, 2 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...	ENSDARG00000044861	34
Q9W6A7 / opn1lw1 / opsin 1 (cone pigments), long-wave-sensitive, 1 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...	ENSDARG00000044862	34
Q9W6A5 / opn1mw1 / opsin 1 (cone pigments), medium-wave-sensitive, 1	ENSDARG00000097008	34
opn1mw2 / opsin 1 (cone pigments), medium-wave-sensitive, 2	ENSDARG00000044280	33
tmtops2b / teleost multiple tissue opsin 2b	ENSDARG00000027822	32
opn1sw1 / opsin 1 (cone pigments), short-wave-sensitive 1 / P51491* / OPN1SW* / P03999* / Short-wave-sensitive opsin 1 * / opsin 1, short wave sensitive*	ENSDARG00000045677	31
tmtops3b / teleost multiple tissue opsin 3b	ENSDARG00000090629	31
tmtopsb / teleost multiple tissue opsin b	ENSDARG00000032246	30
tmtops2a / teleost multiple tissue opsin 2a	ENSDARG00000061515	30
tmtops3a / teleost multiple tissue opsin 3a	ENSDARG00000036460	29
opn4a / opsin 4a (melanopsin) / OPN4* / Q9UHM6* / Q9QXZ9* / opsin 4* / Melanopsin *	ENSDARG00000022098	27

Protein motifs (from Interpro)

Interpro ID	Name
IPR000276	G protein-coupled receptor, rhodopsin-like
IPR001760	Opsin
IPR017452	GPCR, rhodopsin-like, 7TM
IPR027430	Visual pigments (opsins) retinal binding site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007165	signal transduction	IEA
biological_process	GO:0007186	G-protein coupled receptor signaling pathway	IEA
biological_process	GO:0007601	visual perception	IEA
biological_process	GO:0007602	phototransduction	IEA
biological_process	GO:0016038	absorption of visible light	IDA
biological_process	GO:0018298	protein-chromophore linkage	IEA
biological_process	GO:0050896	response to stimulus	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0004871	obsolete signal transducer activity	IEA
molecular_function	GO:0004930	G-protein coupled receptor activity	IEA
molecular_function	GO:0009881	photoreceptor activity	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr