Manteia

ENSDARG00000116976

Danio rerio

Features

Gene ID:	ENSDARG00000116976

Biological name :	parapinopsina

Synonyms :	parapinopsin a / parapinopsina

Possible biological names infered from orthology :

Species:	Danio rerio

Chr. number:	8
Strand:	-1
Band:
Gene start:	53544094
Gene end:	53548145

Corresponding Affymetrix probe sets:

Cross references:	Ensembl peptide - ENSDARP00000156662 NCBI entrez gene - 100331083 See in Manteia. RefSeq - NM_001317756 RefSeq Peptide - NP_001304685 swissprot - A0A0N9NUD7 ZFIN ID - ZDB-GENE-101129-1 Ensembl - ENSDARG00000116976

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name

Species

No match

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
parapinopsinb / parapinopsin b	ENSDARG00000044672	55
valopb / vertebrate ancient long opsin b	ENSDARG00000054181	39
rho / P35359 / rhodopsin / P08100*	ENSDARG00000002193	38
valopa / vertebrate ancient long opsin a	ENSDARG00000021150	38
rhol / rhodopsin, like / RHO* / P15409* / P08100* / rhodopsin*	ENSDARG00000070666	37
Q9W6A6 / opn1mw4 / opsin 1 (cone pigments), medium-wave-sensitive, 4	ENSDARG00000000638	36
Q9W6A8 / opn1sw2 / opsin 1 (cone pigments), short-wave-sensitive 2	ENSDARG00000017274	36
Q8AYM7 / opn1mw3 / opsin 1 (cone pigments), medium-wave-sensitive, 3	ENSDARG00000044279	36
opn1mw2 / opsin 1 (cone pigments), medium-wave-sensitive, 2	ENSDARG00000044280	36
Q8AYN0 / opn1lw2 / opsin 1 (cone pigments), long-wave-sensitive, 2 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...	ENSDARG00000044861	36
Q9W6A7 / opn1lw1 / opsin 1 (cone pigments), long-wave-sensitive, 1 / OPN1MW* / P04000* / P0DN77* / O35599* / P0DN78* / P04001* / OPN1LW* / OPN1MW3* / OPN1MW2* / opsin 1, long wave sensitive...	ENSDARG00000044862	36
Q9W6A5 / opn1mw1 / opsin 1 (cone pigments), medium-wave-sensitive, 1	ENSDARG00000097008	36
tmtopsb / teleost multiple tissue opsin b	ENSDARG00000032246	35
parietopsin	ENSDARG00000052056	34
opn1sw1 / opsin 1 (cone pigments), short-wave-sensitive 1 / P51491* / OPN1SW* / P03999* / Short-wave-sensitive opsin 1 * / opsin 1, short wave sensitive*	ENSDARG00000045677	33
tmtops2b / teleost multiple tissue opsin 2b	ENSDARG00000027822	31
tmtops3b / teleost multiple tissue opsin 3b	ENSDARG00000090629	31
tmtops3a / teleost multiple tissue opsin 3a	ENSDARG00000036460	30
tmtops2a / teleost multiple tissue opsin 2a	ENSDARG00000061515	30
opn3 / opsin 3 / Q9H1Y3* / Q9WUK7*	ENSDARG00000052775	29

Protein motifs (from Interpro)

Interpro ID	Name
IPR000276	G protein-coupled receptor, rhodopsin-like
IPR001760	Opsin
IPR017452	GPCR, rhodopsin-like, 7TM

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007165	signal transduction	IEA
biological_process	GO:0007186	G-protein coupled receptor signaling pathway	IEA
biological_process	GO:0007601	visual perception	IEA
biological_process	GO:0007602	phototransduction	IEA
biological_process	GO:0009584	detection of visible light	IEA
biological_process	GO:0016039	absorption of UV light	IDA
biological_process	GO:0018298	protein-chromophore linkage	IEA
biological_process	GO:0050896	response to stimulus	IEA
cellular_component	GO:0016020	membrane	IEA
cellular_component	GO:0016021	integral component of membrane	IEA
molecular_function	GO:0004871	obsolete signal transducer activity	IEA
molecular_function	GO:0004930	G-protein coupled receptor activity	IEA
molecular_function	GO:0008020	G-protein coupled photoreceptor activity	IDA
molecular_function	GO:0009881	photoreceptor activity	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2025 contact: otassy@igbmc.fr