ENSGALG00000001773


Gallus gallus

Features
Gene ID: ENSGALG00000001773
  
Biological name :RFX2
  
Synonyms : regulatory factor X2 / RFX2
  
Possible biological names infered from orthology : DNA-binding protein RFX2 / P48378 / P48379
  
Species: Gallus gallus
  
Chr. number: 28
Strand: -1
Band:
Gene start: 1576435
Gene end: 1603526
  
Corresponding Affymetrix probe sets: GgaAffx.25108.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000002721
Ensembl peptide - ENSGALP00000054710
NCBI entrez gene - 420092     See in Manteia.
RefSeq - XM_015299845
RefSeq - XM_015299843
RefSeq - XM_015299844
RefSeq - XM_004948746
RefSeq - XM_004948748
RefSeq - XM_015299840
RefSeq - XM_015299842
swissprot - E1BSB3
swissprot - A0A1D5PPB1
Ensembl - ENSGALG00000001773
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rfx2ENSDARG00000013575Danio rerio
 RFX2ENSG00000087903Homo sapiens
 Rfx2ENSMUSG00000024206Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RFX3 / regulatory factor X3 / P48380* / P48381* / Transcription factor RFX3 *ENSGALG0000001017968
RFX4 / regulatory factor X4 / Q33E94* / Q7TNK1* / Transcription factor RFX4 *ENSGALG0000001264725
RFX6 / regulatory factor X6 / Q8C7R7* / Q8HWS3* / DNA-binding protein RFX6 *ENSGALG0000001491824
RFX8 / RFX family member 8, lacking RFX DNA binding domain / D3YU81* / Q6ZV50* / DNA-binding protein RFX8 *ENSGALG0000004538819
RFX7 / regulatory factor X7 / Q2KHR2*ENSGALG0000004189610
RFX5 / regulatory factor X5 / P48382* / Q9JL61* / Mus musculus regulatory factor X, 5 (influences HLA class II expression) (Rfx5), transcript variant 2, mRNA.*ENSGALG000000008369


Protein motifs (from Interpro)
Interpro ID Name
 IPR003150  DNA-binding RFX-type winged-helix domain
 IPR007668  RFX1 transcription activation region
 IPR011991  ArsR-like helix-turn-helix domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001675 acrosome assembly IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0060271 cilium assembly IEA
 biological_processGO:1990830 cellular response to leukemia inhibitory factor IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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