ENSGALG00000005408


Gallus gallus

Features
Gene ID: ENSGALG00000005408
  
Biological name :BCO1
  
Synonyms : BCO1 / Beta,beta-carotene 15,15-dioxygenase / Q9I993
  
Possible biological names infered from orthology : beta-carotene oxygenase 1 / Q9HAY6 / Q9JJS6
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 15677760
Gene end: 15691537
  
Corresponding Affymetrix probe sets: Gga.41.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008671
NCBI entrez gene - 395346     See in Manteia.
RefSeq - XM_015292519
RefSeq - NM_204635
RefSeq - XM_015292520
RefSeq Peptide - NP_989966
swissprot - Q9I993
Ensembl - ENSGALG00000005408
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bco1ENSDARG00000104256Danio rerio
 bco1lENSDARG00000103659Danio rerio
 BCO1ENSG00000135697Homo sapiens
 Bco1ENSMUSG00000031845Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
BCO2 / beta-carotene oxygenase 2 / Q99NF1* / Q9BYV7* / Beta,beta-carotene 9,10-oxygenase *ENSGALG0000000786841
RPE65 / Q9YGX2 / Retinoid isomerohydrolase / Q91ZQ5* / Q16518* / RPE65, retinoid isomerohydrolase*ENSGALG0000001125935


Protein motifs (from Interpro)
Interpro ID Name
 IPR004294  Carotenoid oxygenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001523 retinoid metabolic process IDA
 biological_processGO:0032526 response to retinoic acid IDA
 biological_processGO:0042572 retinol metabolic process IEA
 biological_processGO:0042574 retinal metabolic process IEA
 biological_processGO:0055114 oxidation-reduction process IEA
 biological_processGO:1901810 beta-carotene metabolic process IDA
 molecular_functionGO:0003834 beta-carotene 15,15"-monooxygenase activity IDA
 molecular_functionGO:0004497 monooxygenase activity IDA
 molecular_functionGO:0016491 oxidoreductase activity IEA
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051213 dioxygenase activity IEA


Pathways (from Reactome)
Pathway description
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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