ENSDARG00000103659


Danio rerio

Features
Gene ID: ENSDARG00000103659
  
Biological name :bco1l
  
Synonyms : bco1l / beta-carotene oxygenase 1, like
  
Possible biological names infered from orthology : BCO1 / Beta,beta-carotene 15,15-dioxygenase / beta-carotene oxygenase 1 / Q9HAY6 / Q9JJS6
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 65240227
Gene end: 65252938
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000132538
NCBI entrez gene - 393580     See in Manteia.
RefSeq - NM_200608
RefSeq Peptide - NP_956902
swissprot - A0A0R4IFG6
ZFIN ID - ZDB-GENE-040426-1191
Ensembl - ENSDARG00000103659
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 BCO1ENSGALG00000005408Gallus gallus
 BCO1ENSG00000135697Homo sapiens
 Bco1ENSMUSG00000031845Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
bco1 / beta-carotene oxygenase 1 / Q9HAY6* / Q9JJS6* / Beta,beta-carotene 15,15-dioxygenase *ENSDARG0000010425650
bco2a / beta-carotene oxygenase 2a / BCO2* / Q99NF1* / Q9BYV7* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000005572241
bco2b / beta-carotene oxygenase 2b / BCO2* / Q99NF1* / Q9BYV7* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000004171540
bco2l / beta-carotene 15, 15-dioxygenase 2, like / BCO2* / Q9BYV7* / Q99NF1* / beta-carotene oxygenase 2* / Beta,beta-carotene 9,10-oxygenase *ENSDARG0000002762038
A9C3R8 / rpe65c / retinal pigment epithelium-specific protein 65c / RPE65* / Q91ZQ5* / Q16518* / Retinoid isomerohydrolase * / RPE65, retinoid isomerohydrolase*ENSDARG0000005442035
A9C3R9 / rpe65b / retinal pigment epithelium-specific protein 65b / RPE65* / Q91ZQ5* / Q16518* / Retinoid isomerohydrolase * / RPE65, retinoid isomerohydrolase*ENSDARG0000009475234
rpe65a / Q6PBW5 / retinal pigment epithelium-specific protein 65a / RPE65* / Q16518* / RPE65, retinoid isomerohydrolase*ENSDARG0000000748033


Protein motifs (from Interpro)
Interpro ID Name
 IPR004294  Carotenoid oxygenase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0055114 oxidation-reduction process IEA
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Retinoid metabolism and transport


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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